More than 300 homologs were found in PanDaTox collection
for query gene BBta_6031 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6031  putative ABC transporter, permease protein  100 
 
 
325 aa  627  1e-179  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  63.87 
 
 
289 aa  347  1e-94  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  61.51 
 
 
288 aa  343  2e-93  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  68.98 
 
 
286 aa  338  8e-92  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  55.56 
 
 
375 aa  335  5e-91  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  62.75 
 
 
286 aa  334  1e-90  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  60.14 
 
 
281 aa  332  4e-90  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  54.06 
 
 
375 aa  329  4e-89  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0180  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  62.28 
 
 
283 aa  315  5e-85  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.105797  n/a   
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  65.87 
 
 
283 aa  315  8e-85  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  64.49 
 
 
303 aa  313  1.9999999999999998e-84  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_009049  Rsph17029_1813  binding-protein-dependent transport systems inner membrane component  61.92 
 
 
283 aa  313  2.9999999999999996e-84  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.210707  normal  0.296576 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  63.6 
 
 
322 aa  291  1e-77  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  64.71 
 
 
321 aa  283  3.0000000000000004e-75  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  64.71 
 
 
321 aa  282  5.000000000000001e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  58.57 
 
 
316 aa  280  3e-74  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  54.58 
 
 
362 aa  276  2e-73  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1083  binding-protein-dependent transport systems inner membrane component  64.1 
 
 
321 aa  270  2e-71  Methylobacterium populi BJ001  Bacteria  normal  0.148611  normal  0.032179 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  42.7 
 
 
322 aa  201  1.9999999999999998e-50  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  44.69 
 
 
306 aa  194  1e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
268 aa  127  2.0000000000000002e-28  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
246 aa  127  2.0000000000000002e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  36 
 
 
272 aa  124  2e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  33.72 
 
 
268 aa  124  3e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
272 aa  124  3e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
272 aa  120  3.9999999999999996e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.78 
 
 
249 aa  118  1.9999999999999998e-25  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
281 aa  116  5e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
257 aa  116  6e-25  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
260 aa  113  4.0000000000000004e-24  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
288 aa  113  5e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
255 aa  113  5e-24  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  32.49 
 
 
282 aa  113  5e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
283 aa  111  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
253 aa  110  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
264 aa  111  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  31.11 
 
 
254 aa  110  3e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  32.79 
 
 
264 aa  110  4.0000000000000004e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  32.11 
 
 
279 aa  110  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  31.76 
 
 
261 aa  108  1e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.51 
 
 
308 aa  108  1e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  30 
 
 
274 aa  108  1e-22  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  27.66 
 
 
249 aa  108  1e-22  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
278 aa  108  2e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  31.62 
 
 
284 aa  107  3e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3166  ABC transporter, inner membrane subunit  30.15 
 
 
281 aa  107  4e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3904  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
281 aa  107  4e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0667  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
299 aa  106  6e-22  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
257 aa  106  6e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
271 aa  106  7e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  31.75 
 
 
259 aa  105  8e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
288 aa  104  3e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
258 aa  103  3e-21  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
273 aa  103  4e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2574  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
252 aa  102  6e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
253 aa  102  8e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  28.03 
 
 
267 aa  102  1e-20  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  30.29 
 
 
251 aa  102  1e-20  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  29.68 
 
 
250 aa  101  2e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
264 aa  101  2e-20  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
250 aa  101  2e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  29.49 
 
 
254 aa  101  2e-20  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  29.53 
 
 
251 aa  101  2e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
281 aa  101  2e-20  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  27.95 
 
 
250 aa  100  3e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  27.95 
 
 
250 aa  100  4e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  27.95 
 
 
250 aa  100  4e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  27.95 
 
 
250 aa  100  4e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  27.95 
 
 
250 aa  100  4e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  32.31 
 
 
266 aa  99.8  5e-20  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  28.77 
 
 
250 aa  99.8  5e-20  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  28.75 
 
 
256 aa  99.8  5e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  31.66 
 
 
268 aa  99.8  6e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  29.13 
 
 
251 aa  99.8  6e-20  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
282 aa  99.4  7e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  28.77 
 
 
251 aa  99.4  8e-20  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  35.2 
 
 
247 aa  99  9e-20  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
259 aa  99  9e-20  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  30 
 
 
273 aa  99  9e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  28.94 
 
 
250 aa  99  1e-19  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  31.03 
 
 
266 aa  98.2  2e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  30.99 
 
 
278 aa  97.8  2e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  28.16 
 
 
256 aa  98.2  2e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  26.91 
 
 
285 aa  98.2  2e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_013743  Htur_0669  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
258 aa  97.8  2e-19  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
254 aa  97.4  3e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  28.45 
 
 
258 aa  97.1  3e-19  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  30.99 
 
 
279 aa  97.4  3e-19  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
270 aa  97.4  3e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
265 aa  97.4  3e-19  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.08 
 
 
298 aa  95.9  7e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  27.45 
 
 
287 aa  95.9  9e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_013093  Amir_4889  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
258 aa  95.9  9e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.90454  n/a   
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
282 aa  95.9  9e-19  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
277 aa  95.5  1e-18  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0469  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
274 aa  95.5  1e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.858995  n/a   
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  28.75 
 
 
266 aa  95.5  1e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  29.06 
 
 
257 aa  94.4  2e-18  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0258  binding-protein-dependent transport systems inner membrane component  35 
 
 
274 aa  94.4  2e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.750925 
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
282 aa  94.7  2e-18  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
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