More than 300 homologs were found in PanDaTox collection
for query gene BBta_5941 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  100 
 
 		 206 aa  407  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  43.75 
 
 		 213 aa  179  2.9999999999999997e-44  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  41.18 
 
 		 212 aa  172  3.9999999999999995e-42  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_010581  Bind_0304  two component LuxR family transcriptional regulator  43.5 
 
 		 229 aa  170  1e-41  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.103244 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  40.87 
 
 		 215 aa  163  2.0000000000000002e-39  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  43.63 
 
 		 220 aa  162  3e-39  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  41.87 
 
 		 232 aa  157  9e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  44.61 
 
 		 210 aa  155  5.0000000000000005e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_009485  BBta_2236  two-component LuxR family response regulator  43.84 
 
 		 211 aa  155  5.0000000000000005e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.520528  normal  0.548087 
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  38.81 
 
 		 211 aa  153  2e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  44.12 
 
 		 210 aa  150  8.999999999999999e-36  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011887  Mnod_8027  two component transcriptional regulator, LuxR family  43.35 
 
 		 211 aa  150  1e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.982767  n/a   
 
 
-
 
NC_008786  Veis_3303  two component LuxR family transcriptional regulator  41.58 
 
 		 222 aa  146  2.0000000000000003e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.248413 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  41.83 
 
 		 214 aa  144  1e-33  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_011894  Mnod_7525  two component transcriptional regulator, LuxR family  39.41 
 
 		 210 aa  143  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.588744  n/a   
 
 
-
 
NC_011757  Mchl_4917  two component transcriptional regulator, LuxR family  41.67 
 
 		 221 aa  142  4e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4453  response regulator receiver  42.08 
 
 		 229 aa  142  5e-33  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.731843 
 
 
-
 
NC_010725  Mpop_4967  two component transcriptional regulator, LuxR family  41.67 
 
 		 220 aa  141  6e-33  Methylobacterium populi BJ001  Bacteria  normal  0.103677  normal  0.0219916 
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  38.73 
 
 		 216 aa  140  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  40.69 
 
 		 223 aa  139  1.9999999999999998e-32  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  41.09 
 
 		 226 aa  140  1.9999999999999998e-32  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  39.02 
 
 		 224 aa  140  1.9999999999999998e-32  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal  1 
 
 
-
 
NC_008781  Pnap_2640  two component LuxR family transcriptional regulator  40.2 
 
 		 205 aa  140  1.9999999999999998e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.437778  normal  1 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  40.89 
 
 		 224 aa  139  1.9999999999999998e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0944476 
 
 
-
 
NC_010505  Mrad2831_4197  two component LuxR family transcriptional regulator  42.29 
 
 		 230 aa  138  4.999999999999999e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.182672  normal  0.341651 
 
 
-
 
NC_011666  Msil_0485  two component transcriptional regulator, LuxR family  38.61 
 
 		 208 aa  138  4.999999999999999e-32  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  38.35 
 
 		 220 aa  137  1e-31  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  40.59 
 
 		 225 aa  137  1e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal  1 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  40.59 
 
 		 225 aa  137  1e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal  1 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  39.51 
 
 		 210 aa  137  1e-31  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  39.05 
 
 		 208 aa  136  2e-31  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  33.96 
 
 		 217 aa  137  2e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1168  LuxR family transcriptional regulator  34.31 
 
 		 216 aa  133  1.9999999999999998e-30  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  37.38 
 
 		 217 aa  133  1.9999999999999998e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_009656  PSPA7_3314  putative two-component response regulator  37.2 
 
 		 225 aa  132  3e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_0828  response regulator  34.31 
 
 		 216 aa  132  3e-30  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.0183204  n/a   
 
 
-
 
NC_009727  CBUD_0998  response regulator  34.13 
 
 		 214 aa  132  3e-30  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  36.11 
 
 		 224 aa  132  3.9999999999999996e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010117  COXBURSA331_A0896  LuxR family transcriptional regulator  33.82 
 
 		 214 aa  132  5e-30  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_38900  putative two-component response regulator  39.13 
 
 		 225 aa  132  5e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal  1 
 
 
-
 
NC_010717  PXO_01515  transcriptional regulator LuxR/uhpA family  36.54 
 
 		 215 aa  131  6e-30  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.422594  n/a   
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  37.44 
 
 		 218 aa  130  1.0000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal  1 
 
 
-
 
NC_010513  Xfasm12_2177  response regulator receiver protein  37.8 
 
 		 220 aa  130  2.0000000000000002e-29  Xylella fastidiosa M12  Bacteria  normal  0.430622  n/a   
 
 
-
 
NC_010577  XfasM23_2089  two component LuxR family transcriptional regulator  37.8 
 
 		 220 aa  130  2.0000000000000002e-29  Xylella fastidiosa M23  Bacteria  normal  0.954326  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  36.19 
 
 		 221 aa  130  2.0000000000000002e-29  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_3597  two component LuxR family transcriptional regulator  36.41 
 
 		 214 aa  129  2.0000000000000002e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A0478  two-component response regulator  36.23 
 
 		 215 aa  129  2.0000000000000002e-29  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.0760202 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  39.71 
 
 		 218 aa  129  4.0000000000000003e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  38.46 
 
 		 220 aa  129  4.0000000000000003e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  34.62 
 
 		 213 aa  128  5.0000000000000004e-29  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  36.19 
 
 		 222 aa  127  8.000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_009439  Pmen_1951  two component LuxR family transcriptional regulator  35.58 
 
 		 216 aa  127  8.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.142543  normal  0.70584 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  38.16 
 
 		 211 aa  127  1.0000000000000001e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  34.76 
 
 		 230 aa  127  1.0000000000000001e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  35.71 
 
 		 226 aa  127  1.0000000000000001e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  37.67 
 
 		 221 aa  126  2.0000000000000002e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  33.66 
 
 		 210 aa  126  2.0000000000000002e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  33.65 
 
 		 210 aa  126  3e-28  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  35.71 
 
 		 228 aa  126  3e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  34.76 
 
 		 228 aa  125  4.0000000000000003e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_011004  Rpal_3423  two component transcriptional regulator, LuxR family  35.07 
 
 		 235 aa  125  5e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.324081  n/a   
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  34.78 
 
 		 212 aa  125  6e-28  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  38.03 
 
 		 216 aa  124  7e-28  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011071  Smal_1526  two component transcriptional regulator, LuxR family  35.1 
 
 		 215 aa  124  7e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.88337  normal  1 
 
 
-
 
NC_009092  Shew_1824  response regulator  33.33 
 
 		 229 aa  124  7e-28  Shewanella loihica PV-4  Bacteria  normal  0.152948  normal  1 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  32.85 
 
 		 213 aa  124  8.000000000000001e-28  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  37.56 
 
 		 216 aa  124  1e-27  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1030  two component LuxR family transcriptional regulator  33.33 
 
 		 215 aa  123  2e-27  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6781  two component LuxR family transcriptional regulator  35.96 
 
 		 212 aa  123  2e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.156502  normal  1 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  38.28 
 
 		 218 aa  123  2e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  33.97 
 
 		 214 aa  123  2e-27  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  34.76 
 
 		 230 aa  122  3e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  40.31 
 
 		 218 aa  122  4e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_0745  putative two-component response regulator  36.59 
 
 		 210 aa  122  4e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.536324  n/a   
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  33.17 
 
 		 210 aa  122  4e-27  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  37.75 
 
 		 219 aa  122  4e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  36.62 
 
 		 218 aa  122  4e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_2455  response regulator  32.34 
 
 		 214 aa  122  4e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.140183  normal  0.431169 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  34.76 
 
 		 228 aa  122  4e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  31.73 
 
 		 214 aa  122  4e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  35.44 
 
 		 228 aa  122  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_004347  SO_1860  response regulator  32.34 
 
 		 214 aa  122  5e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  40.62 
 
 		 227 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  37.5 
 
 		 242 aa  122  5e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_07840  putative two-component response regulator  36.1 
 
 		 210 aa  122  5e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.0171986 
 
 
-
 
NC_009997  Sbal195_2677  response regulator  32.34 
 
 		 214 aa  121  6e-27  Shewanella baltica OS195  Bacteria  normal  0.0738952  normal  0.957867 
 
 
-
 
NC_009665  Shew185_2600  response regulator  32.34 
 
 		 214 aa  121  6e-27  Shewanella baltica OS185  Bacteria  hitchhiker  0.000388579  n/a   
 
 
-
 
NC_011663  Sbal223_1782  response regulator  32.34 
 
 		 214 aa  121  6e-27  Shewanella baltica OS223  Bacteria  normal  0.0381154  hitchhiker  0.0000000750596 
 
 
-
 
NC_008700  Sama_1607  response regulator  33.17 
 
 		 214 aa  121  6e-27  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00000106395  normal  1 
 
 
-
 
NC_009901  Spea_1953  response regulator  33.33 
 
 		 214 aa  121  6e-27  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00404481  n/a   
 
 
-
 
NC_009052  Sbal_2562  response regulator  32.34 
 
 		 214 aa  121  6e-27  Shewanella baltica OS155  Bacteria  normal  0.0171044  n/a   
 
 
-
 
NC_009438  Sputcn32_1639  response regulator  32.34 
 
 		 226 aa  121  8e-27  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00137195  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  34.31 
 
 		 214 aa  121  8e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  32.34 
 
 		 214 aa  121  8e-27  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal  1 
 
 
-
 
NC_008577  Shewana3_1608  response regulator  32.34 
 
 		 214 aa  121  8e-27  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_013411  GYMC61_2911  two component transcriptional regulator, LuxR family  33.17 
 
 		 209 aa  121  9e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  36.45 
 
 		 215 aa  121  9e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  32.68 
 
 		 213 aa  120  9.999999999999999e-27  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_010506  Swoo_2150  response regulator  33 
 
 		 216 aa  120  9.999999999999999e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0590135  normal  1 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  34.93 
 
 		 235 aa  120  9.999999999999999e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
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