9 homologs were found in PanDaTox collection
for query gene BBta_3905 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_3905  hypothetical protein  100 
 
 
157 aa  327  3e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.306365  normal  0.736098 
 
 
-
 
NC_007925  RPC_2832  hypothetical protein  51.59 
 
 
155 aa  155  2e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.574507  normal 
 
 
-
 
NC_011004  Rpal_2762  conserved hypothetical protein; putative signal peptide  50.99 
 
 
156 aa  150  5e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6180  hypothetical protein  30.57 
 
 
177 aa  55.1  4e-07  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.239187  n/a   
 
 
-
 
NC_011004  Rpal_0088  Peptidoglycan-binding domain 1 protein  29.77 
 
 
448 aa  53.9  9e-07  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0075  peptidoglycan binding domain-containing protein  27.66 
 
 
459 aa  49.7  1e-05  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.542735 
 
 
-
 
NC_007958  RPD_0214  peptidoglycan binding domain-containing protein  26.67 
 
 
454 aa  47.8  6e-05  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.103118 
 
 
-
 
NC_007778  RPB_0618  peptidoglycan binding domain-containing protein  34.33 
 
 
460 aa  44.7  0.0005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.559119  normal  0.773085 
 
 
-
 
NC_011894  Mnod_1737  Peptidoglycan-binding domain 1 protein  27.42 
 
 
466 aa  41.6  0.004  Methylobacterium nodulans ORS 2060  Bacteria  hitchhiker  0.00165447  n/a   
 
 
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