More than 300 homologs were found in PanDaTox collection
for query gene BBta_0045 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_0045  putative haloacid dehalogenase-like hydrolase  100 
 
 
232 aa  469  1.0000000000000001e-131  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.605496  normal  0.617373 
 
 
-
 
NC_007925  RPC_0467  HAD family hydrolase  63.68 
 
 
219 aa  259  4e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.577769 
 
 
-
 
NC_007958  RPD_0243  HAD family hydrolase  63.21 
 
 
217 aa  257  1e-67  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0589  HAD family hydrolase  61.57 
 
 
217 aa  245  4.9999999999999997e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0453  HAD-superfamily hydrolase, subfamily IA, variant 3  61.11 
 
 
219 aa  242  3.9999999999999997e-63  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0996  HAD family hydrolase  48.61 
 
 
219 aa  229  2e-59  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0106068 
 
 
-
 
NC_012848  Rleg_4948  HAD-superfamily hydrolase, subfamily IA, variant 3  47.98 
 
 
223 aa  211  5.999999999999999e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0085  HAD family hydrolase  48.13 
 
 
228 aa  197  2.0000000000000003e-49  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3783  HAD family hydrolase  49.3 
 
 
242 aa  196  3e-49  Chelativorans sp. BNC1  Bacteria  normal  0.0711244  n/a   
 
 
-
 
NC_007413  Ava_0109  HAD family hydrolase  42.01 
 
 
223 aa  179  2.9999999999999997e-44  Anabaena variabilis ATCC 29413  Bacteria  normal  decreased coverage  0.00453013 
 
 
-
 
NC_009636  Smed_2352  HAD family hydrolase  46.89 
 
 
222 aa  179  2.9999999999999997e-44  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00492029  normal 
 
 
-
 
NC_011894  Mnod_1142  HAD-superfamily hydrolase, subfamily IA, variant 3  49.53 
 
 
231 aa  177  1e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.513371  n/a   
 
 
-
 
NC_011989  Avi_1080  hypothetical protein  40.72 
 
 
229 aa  175  6e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0603  HAD family hydrolase  39.82 
 
 
230 aa  175  6e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.432882  n/a   
 
 
-
 
NC_012850  Rleg_3747  HAD-superfamily hydrolase, subfamily IA, variant 3  49.28 
 
 
229 aa  174  9.999999999999999e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.422409  normal 
 
 
-
 
NC_010511  M446_2179  HAD family hydrolase  49.3 
 
 
223 aa  172  2.9999999999999996e-42  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_010725  Mpop_3493  HAD-superfamily hydrolase, subfamily IA, variant 3  48.77 
 
 
228 aa  172  3.9999999999999995e-42  Methylobacterium populi BJ001  Bacteria  normal  normal  0.292984 
 
 
-
 
NC_011989  Avi_3573  hypothetical protein  44.34 
 
 
224 aa  171  7.999999999999999e-42  Agrobacterium vitis S4  Bacteria  normal  0.141866  n/a   
 
 
-
 
NC_007973  Rmet_0110  HAD family hydrolase  42.15 
 
 
227 aa  169  3e-41  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3445  HAD-superfamily hydrolase, subfamily IA, variant 3  47.37 
 
 
229 aa  169  5e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02312  putative unknown enzyme  43.68 
 
 
224 aa  167  1e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00322256  n/a   
 
 
-
 
NC_009636  Smed_0539  HAD family hydrolase  38.5 
 
 
231 aa  167  2e-40  Sinorhizobium medicae WSM419  Bacteria  normal  0.598939  normal  0.598645 
 
 
-
 
NC_010505  Mrad2831_4509  HAD family hydrolase  44.6 
 
 
225 aa  166  2e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0969  HAD superfamily hydrolase  47.09 
 
 
223 aa  165  6.9999999999999995e-40  Brucella suis 1330  Bacteria  normal  0.512298  n/a   
 
 
-
 
NC_004310  BR0489  HAD superfamily hydrolase  38.91 
 
 
228 aa  164  8e-40  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0493  phosphoglycolate phosphatase  38.91 
 
 
228 aa  164  8e-40  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1725  HAD family hydrolase  44.9 
 
 
228 aa  162  4.0000000000000004e-39  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0637  HAD-superfamily hydrolase, subfamily IA, variant 3  38.64 
 
 
229 aa  162  4.0000000000000004e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal  0.213307 
 
 
-
 
NC_007493  RSP_0089  hypothetical protein  44.9 
 
 
228 aa  162  5.0000000000000005e-39  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.16166  n/a   
 
 
-
 
NC_009504  BOV_A0909  HAD superfamily hydrolase  46.6 
 
 
223 aa  161  8.000000000000001e-39  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1388  HAD family hydrolase  45.15 
 
 
223 aa  161  9e-39  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5532  HAD-superfamily hydrolase, subfamily IA, variant 3  45.62 
 
 
214 aa  160  1e-38  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0762  HAD family hydrolase  40 
 
 
229 aa  159  3e-38  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3616  HAD-superfamily hydrolase, subfamily IA, variant 3  48.06 
 
 
228 aa  159  3e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0694  HAD-superfamily hydrolase, subfamily IA, variant 3  39.09 
 
 
229 aa  159  4e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0142  HAD family hydrolase  40.54 
 
 
235 aa  159  5e-38  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2303  HAD family hydrolase  42.23 
 
 
230 aa  158  6e-38  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.432343  normal  0.0684019 
 
 
-
 
NC_008228  Patl_4120  HAD family hydrolase  45.11 
 
 
237 aa  158  7e-38  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1679  HAD family hydrolase  43.06 
 
 
228 aa  157  1e-37  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.329871  normal 
 
 
-
 
NC_013947  Snas_5789  HAD-superfamily hydrolase subfamily IA, variant 3  42.13 
 
 
248 aa  156  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.805096 
 
 
-
 
NC_010172  Mext_3293  HAD family hydrolase  46.23 
 
 
245 aa  155  5.0000000000000005e-37  Methylobacterium extorquens PA1  Bacteria  normal  0.567903  normal  0.782847 
 
 
-
 
NC_013132  Cpin_5021  HAD-superfamily hydrolase, subfamily IA, variant 3  38.97 
 
 
223 aa  155  6e-37  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.886555  normal  0.11436 
 
 
-
 
NC_002977  MCA0959  HAD-superfamily hydrolase, subfamily IA, variant 3 family protein  42.47 
 
 
216 aa  154  9e-37  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0734377  n/a   
 
 
-
 
NC_009441  Fjoh_4184  HAD family hydrolase  37.04 
 
 
212 aa  154  1e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2542  HAD family hydrolase  39.35 
 
 
214 aa  152  4e-36  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.214098 
 
 
-
 
NC_003295  RSc0271  hypothetical protein  38.91 
 
 
229 aa  151  8e-36  Ralstonia solanacearum GMI1000  Bacteria  normal  0.586518  normal 
 
 
-
 
NC_007963  Csal_0637  HAD family hydrolase  39.19 
 
 
230 aa  150  1e-35  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.808868  n/a   
 
 
-
 
NC_010682  Rpic_0122  HAD-superfamily hydrolase, subfamily IA, variant 3  38.46 
 
 
229 aa  150  2e-35  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1543  HAD family hydrolase  40.83 
 
 
218 aa  149  4e-35  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.290377 
 
 
-
 
NC_008783  BARBAKC583_0412  HAD family hydrolase  35.75 
 
 
230 aa  149  4e-35  Bartonella bacilliformis KC583  Bacteria  normal  0.983661  n/a   
 
 
-
 
NC_009952  Dshi_0545  HAD-superfamily hydrolase  40 
 
 
246 aa  148  8e-35  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0418  HAD family hydrolase  37.38 
 
 
228 aa  147  1.0000000000000001e-34  Burkholderia phymatum STM815  Bacteria  normal  normal  0.513093 
 
 
-
 
NC_008687  Pden_4176  HAD family hydrolase  41.28 
 
 
218 aa  147  1.0000000000000001e-34  Paracoccus denitrificans PD1222  Bacteria  normal  0.767688  normal 
 
 
-
 
NC_009484  Acry_2473  HAD family hydrolase  41.28 
 
 
230 aa  147  2.0000000000000003e-34  Acidiphilium cryptum JF-5  Bacteria  normal  0.0237734  n/a   
 
 
-
 
NC_012856  Rpic12D_0130  HAD-superfamily hydrolase, subfamily IA, variant 3  37.9 
 
 
232 aa  146  3e-34  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1899  HAD family hydrolase  40.21 
 
 
233 aa  145  4.0000000000000006e-34  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.629061  n/a   
 
 
-
 
NC_009667  Oant_0642  HAD family hydrolase  38.6 
 
 
255 aa  144  9e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.911495  n/a   
 
 
-
 
NC_007951  Bxe_A0636  HAD family hydrolase  37.85 
 
 
252 aa  144  1e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0665  haloacid dehalogenase, IA family protein  37.1 
 
 
231 aa  141  8e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  0.233376  n/a   
 
 
-
 
NC_010084  Bmul_0610  HAD family hydrolase  36.45 
 
 
260 aa  141  8e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6015  HAD family hydrolase  37.38 
 
 
228 aa  140  9.999999999999999e-33  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3047  HAD-superfamily hydrolase, subfamily IA, variant 3  38.18 
 
 
226 aa  140  9.999999999999999e-33  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2076  HAD family hydrolase  37.38 
 
 
244 aa  140  9.999999999999999e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.140944  n/a   
 
 
-
 
NC_008542  Bcen2424_2687  HAD family hydrolase  37.38 
 
 
244 aa  140  9.999999999999999e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3323  HAD-superfamily hydrolase, subfamily IA, variant 3  36.92 
 
 
228 aa  140  1.9999999999999998e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.866957  normal  0.157588 
 
 
-
 
NC_010002  Daci_5978  HAD family hydrolase  35.37 
 
 
230 aa  140  1.9999999999999998e-32  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.367832 
 
 
-
 
NC_007802  Jann_0442  HAD family hydrolase  40 
 
 
218 aa  140  1.9999999999999998e-32  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2716  HAD family hydrolase  37.38 
 
 
228 aa  140  1.9999999999999998e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6257  HAD-superfamily hydrolase, subfamily IA, variant 3  39.91 
 
 
240 aa  137  2e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.766914 
 
 
-
 
NC_008390  Bamb_2741  HAD family hydrolase  35.81 
 
 
240 aa  136  3.0000000000000003e-31  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2605  HAD family hydrolase  35.98 
 
 
240 aa  136  4e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_07310  putative hydrolase  36.94 
 
 
224 aa  135  4e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.642028  normal  0.985429 
 
 
-
 
NC_012917  PC1_4274  6-phosphogluconate phosphatase  33.64 
 
 
221 aa  134  9.999999999999999e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0596  HAD-superfamily hydrolase  35.19 
 
 
240 aa  133  1.9999999999999998e-30  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3578  hypothetical protein  40 
 
 
227 aa  133  1.9999999999999998e-30  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3250  HAD-superfamily hydrolase, subfamily IA, variant 3  41.7 
 
 
223 aa  132  3e-30  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.313411 
 
 
-
 
NC_007912  Sde_3367  isochorismate synthase  38.89 
 
 
208 aa  132  6e-30  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0514575 
 
 
-
 
NC_008782  Ajs_0330  HAD family hydrolase  37.67 
 
 
225 aa  132  6.999999999999999e-30  Acidovorax sp. JS42  Bacteria  normal  normal  0.438813 
 
 
-
 
NC_009074  BURPS668_0716  haloacid dehalogenase, IA family protein  35.98 
 
 
228 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 668  Bacteria  normal  0.93684  n/a   
 
 
-
 
NC_008836  BMA10229_A2363  HAD-superfamily hydrolase  35.98 
 
 
228 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  0.340076  n/a   
 
 
-
 
NC_009080  BMA10247_2443  HAD-superfamily hydrolase  35.98 
 
 
228 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  0.151709  n/a   
 
 
-
 
NC_006348  BMA0231  HAD-superfamily hydrolase  35.98 
 
 
228 aa  130  2.0000000000000002e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0730  haloacid dehalogenase, IA family protein  35.98 
 
 
228 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2715  HAD-superfamily hydrolase  35.98 
 
 
228 aa  130  2.0000000000000002e-29  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0896  HAD-superfamily hydrolase  35.98 
 
 
228 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_02024  hydrolase  39.55 
 
 
206 aa  129  3e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.247086  n/a   
 
 
-
 
NC_010681  Bphyt_3243  HAD-superfamily hydrolase, subfamily IA, variant 3  37.96 
 
 
237 aa  129  3e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0124526  normal  0.9958 
 
 
-
 
NC_011094  SeSA_A4061  6-phosphogluconate phosphatase  35.85 
 
 
221 aa  129  4.0000000000000003e-29  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4183  6-phosphogluconate phosphatase  35.85 
 
 
221 aa  129  4.0000000000000003e-29  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.201399  normal 
 
 
-
 
NC_011205  SeD_A4240  6-phosphogluconate phosphatase  35.85 
 
 
221 aa  129  5.0000000000000004e-29  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0636361  normal 
 
 
-
 
NC_011080  SNSL254_A4133  6-phosphogluconate phosphatase  35.85 
 
 
221 aa  129  5.0000000000000004e-29  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0258255  normal 
 
 
-
 
NC_011149  SeAg_B4077  6-phosphogluconate phosphatase  35.85 
 
 
221 aa  128  7.000000000000001e-29  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0268  HAD family hydrolase  35.4 
 
 
225 aa  128  7.000000000000001e-29  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4727  HAD-superfamily hydrolase, subfamily IA, variant 3  37.61 
 
 
230 aa  128  8.000000000000001e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4216  6-phosphogluconate phosphatase  35.51 
 
 
223 aa  127  1.0000000000000001e-28  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_4142  6-phosphogluconate phosphatase  34.55 
 
 
221 aa  128  1.0000000000000001e-28  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0723  HAD family hydrolase  37.5 
 
 
240 aa  126  3e-28  Burkholderia xenovorans LB400  Bacteria  normal  0.272248  normal 
 
 
-
 
NC_011071  Smal_2077  HAD-superfamily hydrolase, subfamily IA, variant 3  37.9 
 
 
231 aa  125  4.0000000000000003e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0155497  normal 
 
 
-
 
NC_009485  BBta_1190  hypothetical protein  38.42 
 
 
204 aa  125  5e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.995327  normal 
 
 
-
 
NC_008781  Pnap_2743  HAD family hydrolase  40.11 
 
 
227 aa  125  6e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.994994  normal  0.0511558 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>