17 homologs were found in PanDaTox collection
for query gene Ava_1506 on replicon NC_007413
Organism: Anabaena variabilis ATCC 29413



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007413  Ava_1506  photosystem II reaction center protein T  100 
 
 
35 aa  69.3  2e-11  Anabaena variabilis ATCC 29413  Bacteria  unclonable  3.03065e-15  normal 
 
 
-
 
NC_014248  Aazo_4112  photosystem II protein PsbT  88.57 
 
 
35 aa  63.2  1e-09  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3492  photosystem II reaction center protein T  90.32 
 
 
31 aa  58.2  4e-08  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_3050  photosystem II reaction center protein T  80.65 
 
 
31 aa  55.5  2e-07  Cyanothece sp. PCC 8802  Bacteria  hitchhiker  2.86998e-05  normal  0.441791 
 
 
-
 
NC_011726  PCC8801_3070  photosystem II reaction center protein T  80.65 
 
 
31 aa  55.5  2e-07  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_4665  photosystem II protein PsbT  77.42 
 
 
31 aa  52.8  1e-06  Trichodesmium erythraeum IMS101  Bacteria  normal  0.147116  hitchhiker  0.00819024 
 
 
-
 
NC_007516  Syncc9605_0469a  photosystem II reaction center protein T  77.42 
 
 
31 aa  51.2  5e-06  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_1865  photosystem II reaction center protein T  74.19 
 
 
31 aa  50.1  1e-05  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0696  photosystem II reaction center protein T  70.97 
 
 
31 aa  48.9  2e-05  Synechococcus elongatus PCC 7942  Bacteria  hitchhiker  6.82439e-09  normal  0.133269 
 
 
-
 
NC_007577  PMT9312_0320  photosystem II reaction center protein T  62.5 
 
 
32 aa  48.9  3e-05  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_03381  photosystem II reaction center protein T  62.5 
 
 
32 aa  48.9  3e-05  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0862  photosystem II protein PsbT  68.75 
 
 
32 aa  48.5  3e-05  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  2.1345e-06  decreased coverage  6.08715e-07 
 
 
-
 
NC_009091  P9301_03391  photosystem II reaction center protein T  62.5 
 
 
32 aa  48.9  3e-05  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.696936  n/a   
 
 
-
 
NC_008820  P9303_22131  photosystem II PsbT protein  51.43 
 
 
35 aa  46.2  0.0002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008819  NATL1_04041  photosystem II reaction center protein T  61.29 
 
 
31 aa  46.2  0.0002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.546771 
 
 
-
 
NC_007335  PMN2A_1691  photosystem II reaction center protein T  61.29 
 
 
31 aa  46.2  0.0002  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.734382  n/a   
 
 
-
 
NC_009976  P9211_03491  photosystem II reaction center protein T  51.61 
 
 
31 aa  40.8  0.007  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.580577  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>