More than 300 homologs were found in PanDaTox collection
for query gene Arth_0050 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_0050  binding-protein-dependent transport systems inner membrane component  100 
 
 
305 aa  605  9.999999999999999e-173  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  92.68 
 
 
316 aa  524  1e-148  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009921  Franean1_7051  binding-protein-dependent transport systems inner membrane component  74.41 
 
 
279 aa  387  1e-106  Frankia sp. EAN1pec  Bacteria  normal  0.305839  normal 
 
 
-
 
NC_012848  Rleg_4709  binding-protein-dependent transport systems inner membrane component  50.19 
 
 
278 aa  265  5.999999999999999e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5746  binding-protein-dependent transport systems inner membrane component  49.81 
 
 
278 aa  252  5.000000000000001e-66  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.405999 
 
 
-
 
NC_010003  Pmob_0307  binding-protein-dependent transport systems inner membrane component  40.08 
 
 
274 aa  207  3e-52  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  35.88 
 
 
292 aa  194  2e-48  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
NC_007908  Rfer_0952  binding-protein-dependent transport systems inner membrane component  37 
 
 
271 aa  193  3e-48  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3397  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
287 aa  192  4e-48  Ruegeria sp. TM1040  Bacteria  normal  0.141396  normal  0.659935 
 
 
-
 
NC_004310  BR0237  sugar ABC transporter, permease protein  34.53 
 
 
291 aa  188  9e-47  Brucella suis 1330  Bacteria  normal  0.963709  n/a   
 
 
-
 
NC_009505  BOV_0230  sugar ABC transporter, permease protein  34.53 
 
 
291 aa  188  9e-47  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  40.41 
 
 
295 aa  186  6e-46  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_008010  Dgeo_2818  binding-protein-dependent transport systems inner membrane component  39.69 
 
 
255 aa  185  9e-46  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  37.92 
 
 
277 aa  184  1.0000000000000001e-45  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  35 
 
 
283 aa  179  7e-44  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_008786  Veis_2280  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
280 aa  178  8e-44  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.326107  normal 
 
 
-
 
NC_011661  Dtur_0489  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
274 aa  178  8e-44  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5474  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
280 aa  177  1e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.9066  normal  0.435889 
 
 
-
 
NC_009620  Smed_4977  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
288 aa  178  1e-43  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0547171 
 
 
-
 
NC_012848  Rleg_5211  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
281 aa  177  2e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.610418 
 
 
-
 
NC_008726  Mvan_2542  binding-protein-dependent transport systems inner membrane component  39.03 
 
 
275 aa  177  2e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.607728  normal 
 
 
-
 
NC_012850  Rleg_2428  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
317 aa  176  3e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.443713  normal  0.627473 
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
280 aa  176  4e-43  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_009664  Krad_1115  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
280 aa  176  5e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.565272 
 
 
-
 
NC_013595  Sros_3493  binding-protein-dependent transport systems inner membrane component  37.18 
 
 
316 aa  175  9e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.552575 
 
 
-
 
NC_009338  Mflv_3853  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
275 aa  175  9e-43  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_013946  Mrub_2457  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
275 aa  175  9.999999999999999e-43  Meiothermus ruber DSM 1279  Bacteria  normal  0.741227  normal  0.869108 
 
 
-
 
NC_012792  Vapar_5701  binding-protein-dependent transport systems inner membrane component  40.93 
 
 
278 aa  174  1.9999999999999998e-42  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
275 aa  174  1.9999999999999998e-42  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_012803  Mlut_04600  ABC-type sugar transport system, permease component  35.22 
 
 
295 aa  173  2.9999999999999996e-42  Micrococcus luteus NCTC 2665  Bacteria  normal  0.539803  n/a   
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
277 aa  173  3.9999999999999995e-42  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
275 aa  173  3.9999999999999995e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  38.81 
 
 
281 aa  172  5e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3672  ABC sugar transporter, inner membrane subunit  36.23 
 
 
277 aa  172  5.999999999999999e-42  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.191343  n/a   
 
 
-
 
NC_013947  Snas_1043  binding-protein-dependent transport systems inner membrane component  39.39 
 
 
273 aa  172  5.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.00118636  normal  0.712976 
 
 
-
 
NC_007948  Bpro_0701  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
315 aa  172  6.999999999999999e-42  Polaromonas sp. JS666  Bacteria  normal  0.338666  normal 
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  37.7 
 
 
276 aa  172  7.999999999999999e-42  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3407  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
277 aa  172  7.999999999999999e-42  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.353789  normal  0.790416 
 
 
-
 
NC_011661  Dtur_1741  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
281 aa  171  1e-41  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0549  ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpE  35.46 
 
 
272 aa  171  1e-41  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  33 
 
 
297 aa  171  2e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5636  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
317 aa  170  2e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  0.330167  normal 
 
 
-
 
NC_013595  Sros_5740  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
289 aa  169  6e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.872391  normal  0.176709 
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  35.8 
 
 
273 aa  169  6e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6369  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
317 aa  169  6e-41  Burkholderia phymatum STM815  Bacteria  normal  0.568723  normal 
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
282 aa  167  1e-40  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
279 aa  168  1e-40  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_008699  Noca_3681  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
305 aa  167  1e-40  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
283 aa  167  2e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_009636  Smed_2454  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
286 aa  167  2e-40  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
278 aa  167  2e-40  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
278 aa  167  2e-40  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_008686  Pden_1049  binding-protein-dependent transport systems inner membrane component  35.52 
 
 
280 aa  166  2.9999999999999998e-40  Paracoccus denitrificans PD1222  Bacteria  normal  0.622209  normal 
 
 
-
 
NC_013159  Svir_06510  carbohydrate ABC transporter membrane protein  36.3 
 
 
282 aa  167  2.9999999999999998e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
277 aa  166  2.9999999999999998e-40  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4402  binding-protein-dependent transport systems inner membrane component  36.25 
 
 
288 aa  166  5e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03720  carbohydrate ABC transporter membrane protein  35.8 
 
 
298 aa  165  6.9999999999999995e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.652933 
 
 
-
 
NC_011729  PCC7424_1897  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
291 aa  164  1.0000000000000001e-39  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.3984100000000001e-18 
 
 
-
 
NC_008146  Mmcs_4355  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
289 aa  165  1.0000000000000001e-39  Mycobacterium sp. MCS  Bacteria  normal  0.023138  n/a   
 
 
-
 
NC_008705  Mkms_4441  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
289 aa  165  1.0000000000000001e-39  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0617645 
 
 
-
 
NC_008786  Veis_1881  binding-protein-dependent transport systems inner membrane component  35.8 
 
 
277 aa  165  1.0000000000000001e-39  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.31192  normal  0.345507 
 
 
-
 
NC_009077  Mjls_4735  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
289 aa  165  1.0000000000000001e-39  Mycobacterium sp. JLS  Bacteria  normal  0.820737  normal 
 
 
-
 
NC_008148  Rxyl_1989  binding-protein-dependent transport systems inner membrane component  39.53 
 
 
284 aa  164  2.0000000000000002e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.951557  n/a   
 
 
-
 
NC_013441  Gbro_1868  binding-protein-dependent transport systems inner membrane component  38.27 
 
 
276 aa  164  3e-39  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5860  binding-protein-dependent transport systems inner membrane component  41.04 
 
 
319 aa  163  3e-39  Sinorhizobium medicae WSM419  Bacteria  normal  0.235146  normal 
 
 
-
 
NC_011830  Dhaf_2632  binding-protein-dependent transport systems inner membrane component  40 
 
 
281 aa  163  3e-39  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_3058  binding-protein-dependent transport systems inner membrane component  36.65 
 
 
286 aa  163  3e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4987  binding-protein-dependent transport systems inner membrane component  41.51 
 
 
319 aa  163  3e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2638  binding-protein dependent transport system inner membrane protein  34.41 
 
 
276 aa  162  6e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.269935  normal 
 
 
-
 
NC_009636  Smed_2697  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
293 aa  162  7e-39  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_04600  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
277 aa  162  8.000000000000001e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3932  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
277 aa  162  9e-39  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.410983  n/a   
 
 
-
 
NC_012850  Rleg_3750  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
276 aa  162  9e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.746379  normal 
 
 
-
 
NC_014212  Mesil_1017  binding-protein-dependent transport systems inner membrane component  39.76 
 
 
276 aa  161  1e-38  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3589  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
276 aa  161  1e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.577285  normal 
 
 
-
 
NC_009656  PSPA7_2923  putative binding-protein-dependent maltose/mannitol transport protein  33.85 
 
 
277 aa  161  1e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  0.123543  n/a   
 
 
-
 
NC_008578  Acel_0554  binding-protein-dependent transport systems inner membrane component  38.34 
 
 
296 aa  161  1e-38  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2705  mannitol ABC transporter, permease protein  33.08 
 
 
277 aa  160  2e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00559467  n/a   
 
 
-
 
NC_007484  Noc_0280  ABC transporter, inner membrane subunit  38.96 
 
 
280 aa  160  2e-38  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.787211  n/a   
 
 
-
 
NC_012560  Avin_27380  mannitol ABC transporter permease protein  33.84 
 
 
277 aa  161  2e-38  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2438  binding-protein dependent transport system inner membrane protein  32.97 
 
 
277 aa  160  3e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.179424  hitchhiker  0.00104394 
 
 
-
 
NC_013745  Htur_4652  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
292 aa  159  4e-38  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0409709  n/a   
 
 
-
 
NC_008228  Patl_4118  binding-protein-dependent transport systems inner membrane component  33.07 
 
 
276 aa  160  4e-38  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.402616  n/a   
 
 
-
 
NC_011369  Rleg2_3448  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
276 aa  160  4e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.979947 
 
 
-
 
NC_009485  BBta_1754  putative ABC transporter (permease protein)  36 
 
 
274 aa  159  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.300196  normal  0.512561 
 
 
-
 
NC_010501  PputW619_2039  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
277 aa  159  5e-38  Pseudomonas putida W619  Bacteria  normal  0.830254  normal 
 
 
-
 
NC_010580  Bind_3795  binding-protein-dependent transport systems inner membrane component  36.25 
 
 
276 aa  159  7e-38  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.898693  normal 
 
 
-
 
NC_013159  Svir_16640  ABC-type sugar transport system, permease component  34.21 
 
 
266 aa  159  7e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.961926  normal 
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  34.9 
 
 
281 aa  159  7e-38  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_19780  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
253 aa  159  7e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_34390  putative binding-protein-dependent maltose/mannitol transport protein  33.46 
 
 
277 aa  159  8e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.020452  normal  0.455482 
 
 
-
 
NC_010159  YpAngola_A2084  carbohydrate ABC transporter permease  33.83 
 
 
275 aa  158  1e-37  Yersinia pestis Angola  Bacteria  normal  normal  0.101045 
 
 
-
 
NC_010465  YPK_2278  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
275 aa  158  1e-37  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1682  binding-protein-dependent transport systems inner membrane component  37.01 
 
 
275 aa  158  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.299262  normal 
 
 
-
 
NC_009708  YpsIP31758_2170  carbohydrate ABC transporter permease  33.83 
 
 
275 aa  158  1e-37  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0148377  n/a   
 
 
-
 
NC_010483  TRQ2_0669  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
283 aa  158  1e-37  Thermotoga sp. RQ2  Bacteria  normal  0.586722  n/a   
 
 
-
 
NC_004311  BRA0306  sugar ABC transporter, permease protein  34.55 
 
 
275 aa  157  2e-37  Brucella suis 1330  Bacteria  normal  0.147324  n/a   
 
 
-
 
NC_009832  Spro_2295  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
279 aa  157  2e-37  Serratia proteamaculans 568  Bacteria  normal  0.939147  normal 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
299 aa  157  2e-37  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
279 aa  156  3e-37  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
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