More than 300 homologs were found in PanDaTox collection
for query gene Apar_0391 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  100 
 
 
257 aa  506  9.999999999999999e-143  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  61.29 
 
 
249 aa  315  4e-85  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  51.05 
 
 
260 aa  256  3e-67  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  47.77 
 
 
249 aa  247  1e-64  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  53.45 
 
 
254 aa  245  4.9999999999999997e-64  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  46.09 
 
 
259 aa  228  1e-58  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  42.92 
 
 
265 aa  213  2.9999999999999995e-54  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  39.24 
 
 
265 aa  186  2e-46  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  39.36 
 
 
266 aa  186  4e-46  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  39.36 
 
 
266 aa  186  4e-46  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  39.51 
 
 
257 aa  186  4e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  38.82 
 
 
257 aa  184  1.0000000000000001e-45  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  39.09 
 
 
257 aa  184  1.0000000000000001e-45  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  39.24 
 
 
265 aa  184  1.0000000000000001e-45  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  39.24 
 
 
265 aa  184  1.0000000000000001e-45  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  39.24 
 
 
257 aa  184  1.0000000000000001e-45  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  39.24 
 
 
257 aa  184  1.0000000000000001e-45  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  38.68 
 
 
255 aa  183  2.0000000000000003e-45  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
255 aa  182  4.0000000000000006e-45  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  36.76 
 
 
256 aa  182  6e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  40.36 
 
 
250 aa  181  8.000000000000001e-45  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
257 aa  179  4.999999999999999e-44  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  39.19 
 
 
254 aa  179  4.999999999999999e-44  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
254 aa  177  2e-43  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  43.68 
 
 
222 aa  175  6e-43  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
253 aa  175  6e-43  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  40 
 
 
246 aa  174  1.9999999999999998e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  39.59 
 
 
272 aa  172  5e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
278 aa  170  2e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  38.68 
 
 
268 aa  170  2e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3017  binding-protein-dependent transport systems inner membrane component  41 
 
 
253 aa  169  3e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.946292  normal 
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  39.91 
 
 
272 aa  169  4e-41  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  37.13 
 
 
265 aa  167  1e-40  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
272 aa  166  2.9999999999999998e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
288 aa  166  2.9999999999999998e-40  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  35.92 
 
 
255 aa  163  3e-39  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
253 aa  162  5.0000000000000005e-39  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  37.78 
 
 
243 aa  161  8.000000000000001e-39  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  38.86 
 
 
260 aa  159  5e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  36.2 
 
 
274 aa  157  2e-37  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
249 aa  157  2e-37  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  36.25 
 
 
272 aa  155  6e-37  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
271 aa  155  7e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
283 aa  154  1e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
250 aa  152  2.9999999999999998e-36  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
273 aa  151  8e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
258 aa  149  5e-35  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
250 aa  148  7e-35  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  31.84 
 
 
258 aa  147  1.0000000000000001e-34  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  36.29 
 
 
250 aa  147  2.0000000000000003e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1643  binding-protein dependent transport system inner membrane protein  39.83 
 
 
261 aa  147  2.0000000000000003e-34  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0353041  n/a   
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  31.84 
 
 
258 aa  147  2.0000000000000003e-34  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
273 aa  146  3e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  35.57 
 
 
251 aa  146  3e-34  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_012669  Bcav_0452  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
252 aa  145  9e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0467336 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  34.92 
 
 
251 aa  144  1e-33  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  39.9 
 
 
255 aa  144  2e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1643  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
259 aa  144  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.805205  normal  0.60128 
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
258 aa  144  2e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
263 aa  143  3e-33  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
245 aa  142  5e-33  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
266 aa  142  5e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  32.77 
 
 
284 aa  141  9e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  37.21 
 
 
250 aa  141  9.999999999999999e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  37.21 
 
 
250 aa  141  9.999999999999999e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  37.21 
 
 
250 aa  141  9.999999999999999e-33  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  37.21 
 
 
250 aa  141  9.999999999999999e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  37.21 
 
 
250 aa  141  9.999999999999999e-33  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  34.13 
 
 
251 aa  140  1.9999999999999998e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
256 aa  140  1.9999999999999998e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  33.87 
 
 
250 aa  139  3.9999999999999997e-32  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  34.06 
 
 
279 aa  137  2e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
281 aa  136  3.0000000000000003e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  32.37 
 
 
251 aa  135  5e-31  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  33.33 
 
 
259 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_009523  RoseRS_2763  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
275 aa  132  5e-30  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
268 aa  131  1.0000000000000001e-29  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_013721  HMPREF0424_0654  ABC transporter, permease protein  31.25 
 
 
263 aa  130  2.0000000000000002e-29  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
282 aa  130  2.0000000000000002e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
257 aa  129  4.0000000000000003e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0588  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
238 aa  127  1.0000000000000001e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.98825  normal 
 
 
-
 
NC_009952  Dshi_0906  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
244 aa  127  2.0000000000000002e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.53091  normal 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  29.91 
 
 
256 aa  127  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_010816  BLD_0122  nitrate/sulfonate/bicarbonate ABC transporter permease  30 
 
 
260 aa  125  5e-28  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
254 aa  124  1e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  31.51 
 
 
282 aa  124  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_012560  Avin_21600  aliphatic sulfonates ABC transporter, inner membrane component  29.6 
 
 
284 aa  123  3e-27  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  27.31 
 
 
257 aa  123  3e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_009379  Pnuc_1181  binding-protein-dependent transport systems inner membrane component  27.64 
 
 
271 aa  123  3e-27  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  36.32 
 
 
488 aa  122  6e-27  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
267 aa  122  8e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0644  ABC transporter, inner membrane subunit  36.79 
 
 
238 aa  121  9.999999999999999e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2389  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
275 aa  121  9.999999999999999e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0423  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
297 aa  120  1.9999999999999998e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.283538  n/a   
 
 
-
 
NC_007643  Rru_A3454  binding-protein dependent transport system inner membrane protein  36.57 
 
 
298 aa  120  1.9999999999999998e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  27.78 
 
 
261 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009049  Rsph17029_2297  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
238 aa  120  1.9999999999999998e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0792355  normal  0.132671 
 
 
-
 
NC_011004  Rpal_2777  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
292 aa  119  6e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  27.47 
 
 
254 aa  118  7.999999999999999e-26  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  32.08 
 
 
287 aa  118  9.999999999999999e-26  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
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