More than 300 homologs were found in PanDaTox collection
for query gene Amir_7009 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  100 
 
 
218 aa  424  1e-118  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  65.44 
 
 
221 aa  275  4e-73  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  67.41 
 
 
222 aa  272  3e-72  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  61.09 
 
 
226 aa  264  7e-70  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  66.05 
 
 
239 aa  263  1e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  63.01 
 
 
224 aa  263  2e-69  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  63.35 
 
 
223 aa  260  9e-69  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  63.35 
 
 
226 aa  260  1e-68  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  61.84 
 
 
227 aa  259  3e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  61.29 
 
 
220 aa  255  4e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  56.43 
 
 
250 aa  254  5e-67  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  61.47 
 
 
225 aa  253  1e-66  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  57.71 
 
 
233 aa  253  2e-66  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.7 
 
 
236 aa  251  8e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  64.49 
 
 
217 aa  249  3e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  58.82 
 
 
230 aa  248  4e-65  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  58.45 
 
 
221 aa  247  8e-65  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  63.47 
 
 
225 aa  246  2e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  59.19 
 
 
229 aa  246  2e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  59.09 
 
 
223 aa  245  3e-64  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  57.08 
 
 
225 aa  244  6e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  57.99 
 
 
222 aa  244  7e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  62.22 
 
 
225 aa  244  8e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  58.22 
 
 
231 aa  243  1e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  61.01 
 
 
220 aa  243  2e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  58.48 
 
 
234 aa  243  2e-63  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  59.63 
 
 
216 aa  243  2e-63  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  61.09 
 
 
224 aa  242  3e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  58.9 
 
 
230 aa  241  5e-63  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.53 
 
 
229 aa  241  6e-63  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  60.47 
 
 
220 aa  240  9e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  56.42 
 
 
221 aa  241  9e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  59.38 
 
 
234 aa  240  1e-62  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  57.21 
 
 
242 aa  239  2e-62  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  1.13212e-10 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  58.62 
 
 
235 aa  239  3e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  55.91 
 
 
224 aa  238  7e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  59.11 
 
 
225 aa  238  7e-62  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  57.45 
 
 
239 aa  237  8e-62  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  57.6 
 
 
225 aa  237  9e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  59.45 
 
 
218 aa  236  1e-61  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  57.4 
 
 
227 aa  236  2e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  57.6 
 
 
221 aa  236  2e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  58.33 
 
 
226 aa  235  3e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  56.6 
 
 
249 aa  234  7e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  57.08 
 
 
230 aa  234  7e-61  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  56.42 
 
 
225 aa  234  8e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  55.35 
 
 
228 aa  233  1e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  57.94 
 
 
213 aa  233  1e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  57.41 
 
 
215 aa  233  2e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  56.62 
 
 
224 aa  233  2e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  58.26 
 
 
241 aa  233  2e-60  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  55.71 
 
 
221 aa  232  3e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  56.28 
 
 
234 aa  231  5e-60  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  56.42 
 
 
219 aa  231  5e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  53.25 
 
 
231 aa  231  8e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  57.59 
 
 
230 aa  230  1e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  55.45 
 
 
218 aa  230  1e-59  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  57.34 
 
 
219 aa  229  2e-59  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  57.92 
 
 
227 aa  229  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.01 
 
 
244 aa  229  2e-59  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  53.67 
 
 
215 aa  229  3e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_5719  two component transcriptional regulator, LuxR family  62.67 
 
 
232 aa  229  3e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.21 
 
 
261 aa  228  4e-59  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  57.67 
 
 
219 aa  228  4e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  55.2 
 
 
239 aa  228  6e-59  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  53.88 
 
 
228 aa  227  1e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  56.54 
 
 
220 aa  227  1e-58  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  55.14 
 
 
230 aa  227  1e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  54.79 
 
 
221 aa  226  2e-58  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  52.7 
 
 
228 aa  226  2e-58  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  55.56 
 
 
225 aa  226  3e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  55.5 
 
 
225 aa  225  3e-58  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  49.17 
 
 
248 aa  226  3e-58  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.05 
 
 
226 aa  225  3e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  44.66 
 
 
261 aa  225  4e-58  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  58.99 
 
 
216 aa  224  6e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  57.48 
 
 
221 aa  224  8e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  55.8 
 
 
247 aa  224  8e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  53.18 
 
 
241 aa  223  1e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  53.1 
 
 
232 aa  224  1e-57  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  55.05 
 
 
220 aa  223  1e-57  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  53.49 
 
 
215 aa  223  2e-57  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  57.99 
 
 
220 aa  222  3e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  54.17 
 
 
226 aa  221  4e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  52.97 
 
 
226 aa  221  7e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  56.94 
 
 
302 aa  221  8e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  54.95 
 
 
241 aa  219  2e-56  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  49.32 
 
 
223 aa  219  2e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  54.13 
 
 
222 aa  219  3e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  54.84 
 
 
219 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  54.84 
 
 
225 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  56.11 
 
 
224 aa  218  4e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  53.67 
 
 
219 aa  218  5e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  53.21 
 
 
217 aa  216  1e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  52.58 
 
 
217 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  56.56 
 
 
224 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.41 
 
 
258 aa  217  1e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  50.87 
 
 
234 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  51.72 
 
 
244 aa  216  2e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  52.8 
 
 
217 aa  216  2e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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