12 homologs were found in PanDaTox collection
for query gene Amir_4823 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_4823  hypothetical protein  100 
 
 
242 aa  473  1e-132  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.000000842276  n/a   
 
 
-
 
NC_008699  Noca_1385  hypothetical protein  39.59 
 
 
229 aa  87.4  2e-16  Nocardioides sp. JS614  Bacteria  normal  0.107247  n/a   
 
 
-
 
NC_013595  Sros_0121  hypothetical protein  32.6 
 
 
219 aa  83.6  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0298502  normal 
 
 
-
 
NC_013159  Svir_12250  hypothetical protein  35.34 
 
 
228 aa  82.8  0.000000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_14460  hypothetical protein  31.94 
 
 
226 aa  67.4  0.0000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0267  hypothetical protein  30.39 
 
 
238 aa  66.2  0.0000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.202879  normal  0.132358 
 
 
-
 
NC_013093  Amir_0084  hypothetical protein  33.17 
 
 
217 aa  65.5  0.0000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0045  hypothetical protein  32.67 
 
 
218 aa  60.1  0.00000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0430  hypothetical protein  32.58 
 
 
227 aa  58.2  0.0000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.119408 
 
 
-
 
NC_011830  Dhaf_0784  hypothetical protein  26.42 
 
 
211 aa  57.4  0.0000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3204  hypothetical protein  29 
 
 
220 aa  50.8  0.00002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.20809  unclonable  0.0000000000140296 
 
 
-
 
NC_013947  Snas_0401  hypothetical protein  27.17 
 
 
216 aa  48.5  0.00009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
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