More than 300 homologs were found in PanDaTox collection
for query gene Amir_4260 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  100 
 
 
217 aa  423  1e-117  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  58.6 
 
 
225 aa  243  9.999999999999999e-64  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_012669  Bcav_3891  two component transcriptional regulator, LuxR family  63.59 
 
 
221 aa  236  2e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.05 
 
 
222 aa  234  9e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  54.21 
 
 
223 aa  229  2e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.42 
 
 
224 aa  218  6e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  55.96 
 
 
221 aa  218  7.999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  54.95 
 
 
223 aa  216  2e-55  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  52.8 
 
 
218 aa  216  2e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  53.67 
 
 
226 aa  216  2.9999999999999998e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  53.64 
 
 
222 aa  215  2.9999999999999998e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  55.61 
 
 
234 aa  214  8e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  53.7 
 
 
215 aa  214  8e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  55.14 
 
 
217 aa  214  9.999999999999999e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  55.25 
 
 
222 aa  213  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  54.76 
 
 
215 aa  212  2.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  52.53 
 
 
225 aa  211  5.999999999999999e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  55.4 
 
 
218 aa  211  5.999999999999999e-54  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  53.02 
 
 
239 aa  211  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  54.42 
 
 
226 aa  210  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  53.18 
 
 
221 aa  209  3e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  54.42 
 
 
230 aa  209  3e-53  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  54.13 
 
 
227 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.88 
 
 
226 aa  209  3e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  50.93 
 
 
221 aa  208  5e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.02 
 
 
230 aa  208  5e-53  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.67 
 
 
221 aa  208  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  50.93 
 
 
224 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  52.05 
 
 
228 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  53.24 
 
 
225 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  55.66 
 
 
224 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  53.92 
 
 
224 aa  206  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.44 
 
 
226 aa  206  3e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  54.09 
 
 
229 aa  206  3e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  53.3 
 
 
218 aa  205  3e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.63 
 
 
224 aa  205  4e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  51.74 
 
 
231 aa  205  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  54.09 
 
 
226 aa  205  4e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  55 
 
 
221 aa  204  8e-52  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  52.07 
 
 
228 aa  204  8e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  50.9 
 
 
231 aa  204  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  55.56 
 
 
302 aa  204  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  52.7 
 
 
230 aa  204  1e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.34 
 
 
223 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  54.34 
 
 
225 aa  203  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  54.55 
 
 
225 aa  203  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.27 
 
 
219 aa  203  2e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  52.8 
 
 
219 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  52.31 
 
 
219 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.47 
 
 
223 aa  202  4e-51  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  55.09 
 
 
247 aa  201  5e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.11 
 
 
230 aa  201  6e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  51.12 
 
 
225 aa  201  9e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  53.95 
 
 
218 aa  200  9.999999999999999e-51  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  53 
 
 
224 aa  200  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  52.73 
 
 
223 aa  200  9.999999999999999e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  54.59 
 
 
234 aa  200  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  55.51 
 
 
244 aa  199  3e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  53.08 
 
 
217 aa  199  3.9999999999999996e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  55.71 
 
 
227 aa  199  3.9999999999999996e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  54.38 
 
 
226 aa  198  6e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  53.52 
 
 
220 aa  198  6e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50.92 
 
 
228 aa  197  1.0000000000000001e-49  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.7 
 
 
261 aa  197  1.0000000000000001e-49  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  51.13 
 
 
234 aa  197  1.0000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  50.91 
 
 
225 aa  197  1.0000000000000001e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  51.17 
 
 
241 aa  197  1.0000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  50.45 
 
 
222 aa  197  1.0000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  50.46 
 
 
221 aa  197  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.17 
 
 
220 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  46.64 
 
 
250 aa  196  2.0000000000000003e-49  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  52.61 
 
 
211 aa  196  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  52.05 
 
 
226 aa  196  2.0000000000000003e-49  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  49.08 
 
 
220 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  52.34 
 
 
225 aa  196  3e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  52.34 
 
 
219 aa  196  3e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  50.47 
 
 
215 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  53.24 
 
 
220 aa  196  3e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  50.23 
 
 
230 aa  195  4.0000000000000005e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  48.84 
 
 
220 aa  195  5.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  53.67 
 
 
226 aa  194  6e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  52.97 
 
 
226 aa  194  6e-49  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  49.77 
 
 
219 aa  194  6e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  50.93 
 
 
220 aa  194  9e-49  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  49.3 
 
 
215 aa  194  9e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  49.54 
 
 
214 aa  194  1e-48  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.38 
 
 
239 aa  193  1e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  50.45 
 
 
230 aa  194  1e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  52.11 
 
 
221 aa  193  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  48.61 
 
 
219 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.51 
 
 
236 aa  193  2e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  50 
 
 
215 aa  193  2e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  50.92 
 
 
218 aa  192  3e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  50.7 
 
 
220 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  49.32 
 
 
241 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  53.24 
 
 
217 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  50.22 
 
 
226 aa  191  5e-48  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  53.64 
 
 
215 aa  191  7e-48  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.17 
 
 
229 aa  191  8e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.22 
 
 
244 aa  191  1e-47  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
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