13 homologs were found in PanDaTox collection
for query gene Amir_3783 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_3783  hypothetical protein  100 
 
 
69 aa  137  7e-32  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00138484  n/a   
 
 
-
 
NC_009338  Mflv_3150  hypothetical protein  41.94 
 
 
78 aa  53.1  0.000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0235475  normal 
 
 
-
 
NC_007333  Tfu_1754  hypothetical protein  43.33 
 
 
117 aa  51.2  0.000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3736  hypothetical protein  42.62 
 
 
111 aa  50.1  0.000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.139071  hitchhiker  0.0052659 
 
 
-
 
NC_013159  Svir_16840  hypothetical protein  39.34 
 
 
116 aa  49.7  0.00001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.505478  normal  0.321464 
 
 
-
 
NC_012803  Mlut_22390  hypothetical protein  41.67 
 
 
114 aa  48.1  0.00004  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0195  hypothetical protein  41.67 
 
 
111 aa  46.2  0.0002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.760426 
 
 
-
 
NC_014210  Ndas_4312  hypothetical protein  40.68 
 
 
99 aa  45.4  0.0003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0792  hypothetical protein  37.29 
 
 
71 aa  43.9  0.0008  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0470  hypothetical protein  36.67 
 
 
226 aa  43.5  0.001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8481  hypothetical protein  38.18 
 
 
386 aa  41.2  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3419  hypothetical protein  38.98 
 
 
120 aa  41.2  0.005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.352762  n/a   
 
 
-
 
NC_013093  Amir_0728  hypothetical protein  45.95 
 
 
209 aa  40.8  0.007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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