More than 300 homologs were found in PanDaTox collection
for query gene Amir_2737 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  100 
 
 
227 aa  438  9.999999999999999e-123  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  73.54 
 
 
239 aa  320  9.999999999999999e-87  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  66.07 
 
 
230 aa  273  2.0000000000000002e-72  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  66.96 
 
 
230 aa  272  3e-72  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  62.33 
 
 
226 aa  259  2e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  61.23 
 
 
225 aa  254  1.0000000000000001e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  61.71 
 
 
227 aa  249  2e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  61.54 
 
 
226 aa  246  2e-64  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  57.66 
 
 
224 aa  244  4.9999999999999997e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  61.26 
 
 
225 aa  244  6.999999999999999e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  63.27 
 
 
229 aa  244  9e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  60.81 
 
 
225 aa  243  1.9999999999999999e-63  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  62.9 
 
 
234 aa  241  6e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  59.46 
 
 
221 aa  241  1e-62  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  59.01 
 
 
222 aa  239  2e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  59.28 
 
 
221 aa  238  5.999999999999999e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  60.18 
 
 
225 aa  238  8e-62  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  59.28 
 
 
218 aa  237  9e-62  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  59.11 
 
 
221 aa  237  1e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  57.4 
 
 
219 aa  237  1e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  60.89 
 
 
222 aa  237  1e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  61.99 
 
 
220 aa  236  2e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  58.37 
 
 
225 aa  235  5.0000000000000005e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  58.82 
 
 
226 aa  234  6e-61  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  57.92 
 
 
218 aa  234  9e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  59.64 
 
 
215 aa  233  1.0000000000000001e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  61.64 
 
 
221 aa  234  1.0000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  56.25 
 
 
221 aa  233  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  59.11 
 
 
230 aa  233  2.0000000000000002e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  58.93 
 
 
224 aa  233  2.0000000000000002e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  57.21 
 
 
219 aa  233  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.87 
 
 
224 aa  233  3e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  58.95 
 
 
225 aa  231  5e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  58.56 
 
 
223 aa  231  7.000000000000001e-60  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  57.59 
 
 
234 aa  231  8.000000000000001e-60  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  59.46 
 
 
216 aa  231  9e-60  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  57.33 
 
 
220 aa  229  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  56.14 
 
 
227 aa  229  3e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.48 
 
 
226 aa  228  4e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  56.76 
 
 
219 aa  228  5e-59  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  57.34 
 
 
239 aa  228  6e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  55.17 
 
 
234 aa  228  7e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  58.48 
 
 
220 aa  228  8e-59  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  57.21 
 
 
221 aa  227  1e-58  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  61.19 
 
 
217 aa  227  1e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  59.73 
 
 
219 aa  227  1e-58  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  56.31 
 
 
220 aa  227  1e-58  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  57.21 
 
 
219 aa  227  1e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  58.3 
 
 
221 aa  227  1e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  59.38 
 
 
223 aa  227  1e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  58.41 
 
 
225 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  56.7 
 
 
220 aa  226  3e-58  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  55.91 
 
 
220 aa  225  4e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  57.52 
 
 
225 aa  224  6e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  55.11 
 
 
221 aa  224  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  56.07 
 
 
211 aa  224  1e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  53.51 
 
 
226 aa  224  1e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  58.74 
 
 
222 aa  223  2e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  58.48 
 
 
226 aa  223  2e-57  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  57.47 
 
 
218 aa  223  2e-57  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  60.45 
 
 
241 aa  223  3e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  54.5 
 
 
225 aa  222  4e-57  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  54.05 
 
 
224 aa  221  4.9999999999999996e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.31 
 
 
225 aa  221  6e-57  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  56.7 
 
 
228 aa  221  9e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  55.36 
 
 
235 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  55 
 
 
218 aa  221  9.999999999999999e-57  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  57.34 
 
 
217 aa  220  9.999999999999999e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  56.28 
 
 
215 aa  221  9.999999999999999e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  57.59 
 
 
224 aa  220  1.9999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  55.36 
 
 
230 aa  220  1.9999999999999999e-56  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  53.57 
 
 
231 aa  220  1.9999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  61.19 
 
 
217 aa  219  3.9999999999999997e-56  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  53.33 
 
 
223 aa  218  3.9999999999999997e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.77 
 
 
236 aa  218  5e-56  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  54.55 
 
 
234 aa  218  5e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  48.9 
 
 
233 aa  218  6e-56  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  56.84 
 
 
224 aa  218  7e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  58.99 
 
 
225 aa  218  7e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  53.6 
 
 
215 aa  218  7.999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  57.73 
 
 
214 aa  218  8.999999999999998e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.26 
 
 
244 aa  217  1e-55  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.95 
 
 
229 aa  217  2e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  56.28 
 
 
218 aa  216  2e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  52.56 
 
 
218 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  54.74 
 
 
242 aa  215  4e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  56.52 
 
 
249 aa  214  8e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  51.2 
 
 
250 aa  213  1.9999999999999998e-54  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  56.05 
 
 
222 aa  213  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  52.97 
 
 
249 aa  213  1.9999999999999998e-54  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  53.07 
 
 
228 aa  213  1.9999999999999998e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  54.55 
 
 
218 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  55.05 
 
 
216 aa  213  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  52.47 
 
 
219 aa  212  2.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  52.23 
 
 
222 aa  212  3.9999999999999995e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  54.46 
 
 
224 aa  212  3.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  53.65 
 
 
239 aa  212  4.9999999999999996e-54  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  54.35 
 
 
247 aa  211  4.9999999999999996e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  56.44 
 
 
230 aa  211  7e-54  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  54.67 
 
 
213 aa  211  7.999999999999999e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>