More than 300 homologs were found in PanDaTox collection
for query gene Amir_1844 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1844  binding-protein-dependent transport systems inner membrane component  100 
 
 
291 aa  581  1.0000000000000001e-165  Actinosynnema mirum DSM 43827  Bacteria  normal  0.476032  n/a   
 
 
-
 
NC_013595  Sros_1501  binding-protein-dependent transport systems inner membrane component  75 
 
 
304 aa  423  1e-117  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.707606 
 
 
-
 
NC_014165  Tbis_1088  binding-protein-dependent transporter inner membrane component  72.08 
 
 
288 aa  412  1e-114  Thermobispora bispora DSM 43833  Bacteria  normal  0.616528  hitchhiker  0.00755847 
 
 
-
 
NC_009667  Oant_0353  binding-protein-dependent transport systems inner membrane component  40.71 
 
 
317 aa  203  3e-51  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0740262  n/a   
 
 
-
 
NC_009636  Smed_0187  binding-protein-dependent transport systems inner membrane component  41.64 
 
 
307 aa  198  1.0000000000000001e-49  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2421  binding-protein-dependent transport systems inner membrane component  43.46 
 
 
311 aa  196  3e-49  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.224374 
 
 
-
 
NC_011366  Rleg2_5851  binding-protein-dependent transport systems inner membrane component  41.43 
 
 
311 aa  190  2e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.421015  normal 
 
 
-
 
NC_007802  Jann_3554  binding-protein-dependent transport systems inner membrane component  40 
 
 
311 aa  189  4e-47  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6764  binding-protein-dependent transport systems inner membrane component  41.07 
 
 
326 aa  187  1e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3673  ABC sugar transporter, inner membrane subunit  38.89 
 
 
308 aa  186  5e-46  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.246744  n/a   
 
 
-
 
NC_009050  Rsph17029_3408  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
308 aa  186  5e-46  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.166359  normal  0.855546 
 
 
-
 
NC_012669  Bcav_3774  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
319 aa  179  4e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.198584  normal 
 
 
-
 
NC_010003  Pmob_0028  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
300 aa  177  1e-43  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000378352  n/a   
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  36.58 
 
 
307 aa  176  3e-43  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
296 aa  176  4e-43  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
312 aa  174  1.9999999999999998e-42  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
295 aa  172  5e-42  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_010003  Pmob_0474  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
291 aa  169  6e-41  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
316 aa  169  7e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
262 aa  167  1e-40  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
299 aa  167  2e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  37.39 
 
 
435 aa  166  5.9999999999999996e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
312 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
293 aa  165  1.0000000000000001e-39  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
293 aa  165  1.0000000000000001e-39  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
293 aa  164  2.0000000000000002e-39  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
319 aa  160  2e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
299 aa  160  3e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
319 aa  159  4e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
309 aa  159  5e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
309 aa  159  5e-38  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
299 aa  159  6e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0073  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
294 aa  158  9e-38  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0590  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
315 aa  157  1e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.273483  normal 
 
 
-
 
NC_010524  Lcho_3328  binding-protein-dependent transport systems inner membrane component  30.87 
 
 
304 aa  158  1e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
286 aa  157  2e-37  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  36.16 
 
 
330 aa  156  4e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
427 aa  155  5.0000000000000005e-37  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
328 aa  155  7e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  34.86 
 
 
309 aa  154  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4058  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
309 aa  154  1e-36  Burkholderia phymatum STM815  Bacteria  normal  normal  0.801646 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  33.94 
 
 
300 aa  154  1e-36  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
315 aa  154  2e-36  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5697  binding-protein-dependent transport systems inner membrane component  35.36 
 
 
305 aa  154  2e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.121734 
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
320 aa  153  2.9999999999999998e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  35.45 
 
 
292 aa  152  5.9999999999999996e-36  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_010676  Bphyt_7207  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
296 aa  151  1e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  31.38 
 
 
325 aa  150  2e-35  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_011368  Rleg2_5492  binding-protein-dependent transport systems inner membrane component  30.27 
 
 
328 aa  150  2e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.511246  normal  0.17987 
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
315 aa  150  2e-35  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  34.59 
 
 
288 aa  150  3e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_007952  Bxe_B0419  ABC sugar transporter, inner membrane subunit  32.04 
 
 
296 aa  150  3e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
324 aa  150  3e-35  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1419  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
314 aa  150  3e-35  Nocardioides sp. JS614  Bacteria  normal  0.906597  n/a   
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
301 aa  150  3e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3354  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
299 aa  150  3e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0748  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
337 aa  150  3e-35  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00168888 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
300 aa  149  4e-35  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
310 aa  149  4e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  30.8 
 
 
325 aa  149  4e-35  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3450  binding-protein-dependent transport systems inner membrane component  35.79 
 
 
307 aa  149  7e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
316 aa  149  7e-35  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
306 aa  147  1.0000000000000001e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_012858  Rleg_6633  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
294 aa  148  1.0000000000000001e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.61386 
 
 
-
 
NC_009654  Mmwyl1_0024  binding-protein-dependent transport systems inner membrane component  29.53 
 
 
320 aa  148  1.0000000000000001e-34  Marinomonas sp. MWYL1  Bacteria  normal  0.227719  normal  0.433481 
 
 
-
 
NC_011830  Dhaf_2631  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
305 aa  147  2.0000000000000003e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
314 aa  147  2.0000000000000003e-34  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_013946  Mrub_2089  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
293 aa  147  2.0000000000000003e-34  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000240561  normal  0.90976 
 
 
-
 
NC_012848  Rleg_5336  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
310 aa  147  2.0000000000000003e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.369054 
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  35.42 
 
 
318 aa  147  3e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1880  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
286 aa  147  3e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.262739  normal  0.333569 
 
 
-
 
NC_011368  Rleg2_5469  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
313 aa  146  3e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.394829 
 
 
-
 
NC_008243  Meso_4516  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
290 aa  145  6e-34  Chelativorans sp. BNC1  Bacteria  normal  0.0463372  n/a   
 
 
-
 
NC_011899  Hore_20460  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
321 aa  145  6e-34  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000522199  n/a   
 
 
-
 
NC_011145  AnaeK_4266  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
569 aa  145  6e-34  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011366  Rleg2_5714  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
310 aa  145  7.0000000000000006e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.568061 
 
 
-
 
NC_009620  Smed_4642  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
294 aa  145  8.000000000000001e-34  Sinorhizobium medicae WSM419  Bacteria  normal  0.288658  normal  0.0756683 
 
 
-
 
NC_007760  Adeh_4135  ABC sugar transporter, inner membrane subunit  33.45 
 
 
569 aa  144  1e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  33.45 
 
 
312 aa  144  1e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
295 aa  144  1e-33  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6194  binding-protein-dependent transport systems inner membrane component  37.6 
 
 
303 aa  145  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.209211  normal  0.916696 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
320 aa  144  1e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_009667  Oant_0362  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
312 aa  144  1e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.541424  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
294 aa  145  1e-33  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_013744  Htur_4398  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
314 aa  144  2e-33  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0144983  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
316 aa  144  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5689  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
294 aa  144  2e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
328 aa  144  2e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_004311  BRA0749  sugar ABC transporter, permease protein, putative  31.85 
 
 
289 aa  143  3e-33  Brucella suis 1330  Bacteria  normal  0.444567  n/a   
 
 
-
 
NC_011891  A2cp1_4288  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
569 aa  143  3e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0699  putative sugar ABC transporter, permease protein  31.85 
 
 
289 aa  143  3e-33  Brucella ovis ATCC 25840  Bacteria  normal  0.383075  n/a   
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
310 aa  143  4e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
312 aa  143  4e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_009620  Smed_3590  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
301 aa  143  4e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.657903  normal 
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
321 aa  142  5e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
306 aa  142  7e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
294 aa  142  7e-33  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2501  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
312 aa  142  8e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
304 aa  141  9.999999999999999e-33  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_009832  Spro_2525  binding-protein-dependent transport systems inner membrane component  31.83 
 
 
330 aa  141  9.999999999999999e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
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