More than 300 homologs were found in PanDaTox collection
for query gene Amir_1591 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  100 
 
 
336 aa  678    Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  56.78 
 
 
409 aa  337  9.999999999999999e-92  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  58.76 
 
 
306 aa  327  2.0000000000000001e-88  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  55.1 
 
 
320 aa  323  2e-87  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  58.59 
 
 
424 aa  321  9.999999999999999e-87  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  54.55 
 
 
326 aa  317  3e-85  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  51.3 
 
 
463 aa  310  2e-83  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  53.24 
 
 
404 aa  307  2.0000000000000002e-82  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  57.73 
 
 
311 aa  306  2.0000000000000002e-82  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  57.73 
 
 
311 aa  306  4.0000000000000004e-82  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  57.73 
 
 
311 aa  306  4.0000000000000004e-82  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  53.06 
 
 
307 aa  299  4e-80  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  50 
 
 
307 aa  286  2e-76  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  49.53 
 
 
466 aa  272  8.000000000000001e-72  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  45.21 
 
 
393 aa  260  2e-68  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  49.02 
 
 
394 aa  256  5e-67  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  50.37 
 
 
407 aa  252  5.000000000000001e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  44.69 
 
 
404 aa  218  1e-55  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  39.62 
 
 
497 aa  214  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  40.38 
 
 
509 aa  201  9.999999999999999e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  41.28 
 
 
296 aa  196  4.0000000000000005e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  44.02 
 
 
504 aa  195  8.000000000000001e-49  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  39.55 
 
 
489 aa  190  4e-47  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  40.38 
 
 
434 aa  189  4e-47  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  38.26 
 
 
434 aa  189  7e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  42.31 
 
 
390 aa  187  2e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  36.83 
 
 
505 aa  187  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  41.61 
 
 
363 aa  184  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  38.46 
 
 
420 aa  177  2e-43  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  38.16 
 
 
303 aa  176  5e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  37.74 
 
 
414 aa  174  1.9999999999999998e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  43.17 
 
 
313 aa  167  2e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  37.63 
 
 
549 aa  166  4e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  33.82 
 
 
468 aa  162  6e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  39.79 
 
 
491 aa  162  6e-39  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  37.17 
 
 
481 aa  160  4e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  35.42 
 
 
567 aa  159  7e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  37.55 
 
 
481 aa  158  1e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  33.71 
 
 
400 aa  158  1e-37  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  36.09 
 
 
349 aa  157  3e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  34.64 
 
 
732 aa  157  3e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  36.27 
 
 
618 aa  157  3e-37  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  33.33 
 
 
382 aa  156  5.0000000000000005e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  38.6 
 
 
468 aa  156  5.0000000000000005e-37  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  37.77 
 
 
512 aa  155  7e-37  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  35.22 
 
 
521 aa  155  9e-37  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  33.44 
 
 
478 aa  154  2e-36  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  37.25 
 
 
493 aa  152  5.9999999999999996e-36  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  38.91 
 
 
506 aa  152  7e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  37.21 
 
 
493 aa  151  1e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  32.75 
 
 
516 aa  150  3e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  38.7 
 
 
490 aa  149  5e-35  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  38.7 
 
 
490 aa  149  5e-35  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  38.7 
 
 
490 aa  149  5e-35  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  36.91 
 
 
410 aa  149  7e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  37.68 
 
 
573 aa  149  8e-35  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  33.92 
 
 
584 aa  147  3e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  36.42 
 
 
497 aa  146  5e-34  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  34.85 
 
 
486 aa  146  6e-34  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  34.92 
 
 
625 aa  145  7.0000000000000006e-34  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  35.62 
 
 
517 aa  145  1e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  36.08 
 
 
453 aa  144  1e-33  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  33.13 
 
 
362 aa  145  1e-33  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  34.73 
 
 
530 aa  144  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  34.91 
 
 
496 aa  142  6e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  33.33 
 
 
522 aa  141  9.999999999999999e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  33.78 
 
 
676 aa  140  3e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  32.11 
 
 
480 aa  140  3e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  33.01 
 
 
432 aa  140  3e-32  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  39.53 
 
 
377 aa  139  4.999999999999999e-32  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  35.84 
 
 
538 aa  139  1e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  38.43 
 
 
365 aa  136  4e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  33.33 
 
 
465 aa  135  7.000000000000001e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  33.71 
 
 
560 aa  134  1.9999999999999998e-30  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  33.33 
 
 
379 aa  134  3e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  32.01 
 
 
545 aa  132  1.0000000000000001e-29  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009565  TBFG_13874  transcriptional regulator  60.36 
 
 
137 aa  130  4.0000000000000003e-29  Mycobacterium tuberculosis F11  Bacteria  normal  0.0355258  normal 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  37.99 
 
 
395 aa  129  5.0000000000000004e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  35.82 
 
 
419 aa  129  7.000000000000001e-29  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  37.73 
 
 
490 aa  124  2e-27  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  33.62 
 
 
405 aa  124  2e-27  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  32.11 
 
 
487 aa  124  3e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  34.1 
 
 
381 aa  123  4e-27  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  32.45 
 
 
520 aa  122  7e-27  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  31.14 
 
 
521 aa  121  1.9999999999999998e-26  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  37.22 
 
 
563 aa  120  1.9999999999999998e-26  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  44.05 
 
 
495 aa  120  3.9999999999999996e-26  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  36.62 
 
 
395 aa  119  6e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  34.25 
 
 
382 aa  119  7.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  36.94 
 
 
414 aa  119  7.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  36.54 
 
 
358 aa  119  7.999999999999999e-26  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  34.04 
 
 
540 aa  118  9.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  32.76 
 
 
520 aa  119  9.999999999999999e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  33.79 
 
 
508 aa  117  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  33.46 
 
 
499 aa  116  5e-25  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  30.16 
 
 
414 aa  115  1.0000000000000001e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  30.95 
 
 
619 aa  115  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  31.01 
 
 
514 aa  115  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  29.48 
 
 
547 aa  114  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  40.56 
 
 
271 aa  114  2.0000000000000002e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
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