More than 300 homologs were found in PanDaTox collection
for query gene Amir_1037 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  100 
 
 
732 aa  1445    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  53.95 
 
 
522 aa  441  9.999999999999999e-123  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  48.48 
 
 
517 aa  383  1e-105  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  41.52 
 
 
538 aa  340  5e-92  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  43.5 
 
 
567 aa  333  6e-90  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  42.94 
 
 
676 aa  325  3e-87  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  43.2 
 
 
493 aa  315  1.9999999999999998e-84  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  44.34 
 
 
490 aa  309  1.0000000000000001e-82  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  44.34 
 
 
490 aa  309  1.0000000000000001e-82  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  44.34 
 
 
490 aa  309  1.0000000000000001e-82  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  43.02 
 
 
497 aa  308  2.0000000000000002e-82  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  42.54 
 
 
493 aa  300  8e-80  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  39.31 
 
 
512 aa  296  1e-78  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  47.21 
 
 
410 aa  291  3e-77  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  39.66 
 
 
496 aa  291  3e-77  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  41.54 
 
 
521 aa  285  2.0000000000000002e-75  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  45.19 
 
 
514 aa  260  6e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_013131  Caci_1912  cell envelope-related transcriptional attenuator  38.02 
 
 
664 aa  253  1e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  40.11 
 
 
414 aa  249  1e-64  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  47.88 
 
 
382 aa  239  1e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  34.09 
 
 
547 aa  234  4.0000000000000004e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_013093  Amir_1299  cell envelope-related transcriptional attenuator  37.97 
 
 
340 aa  205  3e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  34.13 
 
 
491 aa  194  4e-48  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  29.05 
 
 
497 aa  190  8e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  33.55 
 
 
468 aa  187  5e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.67 
 
 
505 aa  184  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  30.75 
 
 
509 aa  182  2e-44  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  28.63 
 
 
504 aa  176  1.9999999999999998e-42  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  31.13 
 
 
734 aa  171  4e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  31.86 
 
 
573 aa  171  5e-41  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  37.41 
 
 
390 aa  169  1e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.02 
 
 
516 aa  169  2e-40  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  31.84 
 
 
625 aa  169  2e-40  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  32.7 
 
 
512 aa  168  4e-40  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  30.97 
 
 
545 aa  164  4.0000000000000004e-39  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  34.62 
 
 
407 aa  163  1e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  30.77 
 
 
530 aa  162  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  32.08 
 
 
486 aa  162  2e-38  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  29.42 
 
 
549 aa  160  9e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  32.49 
 
 
481 aa  159  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  28.9 
 
 
478 aa  159  2e-37  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  37.36 
 
 
336 aa  156  1e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  29.23 
 
 
520 aa  155  2.9999999999999998e-36  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  29.37 
 
 
481 aa  152  2e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  32.7 
 
 
420 aa  151  4e-35  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  33.72 
 
 
349 aa  149  1.0000000000000001e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  30.46 
 
 
526 aa  149  1.0000000000000001e-34  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  34.07 
 
 
414 aa  149  2.0000000000000003e-34  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  29.49 
 
 
618 aa  146  1e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  34.86 
 
 
463 aa  144  6e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  35.17 
 
 
393 aa  143  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  32.76 
 
 
409 aa  142  1.9999999999999998e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  29.82 
 
 
584 aa  142  3e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  29.94 
 
 
453 aa  141  4.999999999999999e-32  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  27.16 
 
 
1336 aa  139  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  35.11 
 
 
311 aa  139  1e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  28.47 
 
 
520 aa  139  1e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  35.11 
 
 
311 aa  139  1e-31  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  28.63 
 
 
643 aa  139  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  35.93 
 
 
307 aa  139  2e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  35.69 
 
 
320 aa  139  2e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  30.51 
 
 
400 aa  139  2e-31  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  30.7 
 
 
560 aa  139  2e-31  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  29.46 
 
 
468 aa  138  3.0000000000000003e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  35.74 
 
 
311 aa  138  3.0000000000000003e-31  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  33.45 
 
 
466 aa  138  4e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  27.97 
 
 
506 aa  137  7.000000000000001e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  26.54 
 
 
684 aa  137  7.000000000000001e-31  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  31.56 
 
 
394 aa  136  9.999999999999999e-31  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  31.8 
 
 
362 aa  134  3.9999999999999996e-30  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  35.56 
 
 
404 aa  134  5e-30  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  34.52 
 
 
307 aa  133  1.0000000000000001e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  33.04 
 
 
306 aa  131  4.0000000000000003e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  30.72 
 
 
379 aa  130  6e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  30.9 
 
 
434 aa  130  9.000000000000001e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  34.86 
 
 
424 aa  130  1.0000000000000001e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  27.96 
 
 
649 aa  128  4.0000000000000003e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3559  cell envelope-related transcriptional attenuator  34.59 
 
 
352 aa  127  7e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  30.48 
 
 
489 aa  126  1e-27  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  26.73 
 
 
699 aa  126  1e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  26.81 
 
 
487 aa  126  1e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  26.73 
 
 
699 aa  126  1e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  30.27 
 
 
406 aa  125  2e-27  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  26.63 
 
 
701 aa  125  2e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_09620  cell envelope-related function transcriptional attenuator common domain protein  33.72 
 
 
353 aa  125  3e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.369888 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  28.26 
 
 
480 aa  125  3e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  33.77 
 
 
619 aa  123  9.999999999999999e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  36.74 
 
 
326 aa  123  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  30.93 
 
 
404 aa  122  1.9999999999999998e-26  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  31.05 
 
 
508 aa  122  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  26.75 
 
 
687 aa  122  3e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  32.08 
 
 
352 aa  121  4.9999999999999996e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  31.3 
 
 
434 aa  121  4.9999999999999996e-26  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  27.68 
 
 
381 aa  120  6e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  27.36 
 
 
521 aa  119  1.9999999999999998e-25  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  32.84 
 
 
540 aa  118  3e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  28.1 
 
 
395 aa  117  5e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  32.08 
 
 
377 aa  117  6e-25  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  29.15 
 
 
499 aa  117  1.0000000000000001e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  31.8 
 
 
296 aa  117  1.0000000000000001e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
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