More than 300 homologs were found in PanDaTox collection
for query gene Amir_0199 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  100 
 
 
532 aa  1030    Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  43.02 
 
 
545 aa  340  4e-92  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  46.56 
 
 
518 aa  281  3e-74  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  44.93 
 
 
540 aa  281  3e-74  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  46.91 
 
 
545 aa  280  4e-74  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  39.58 
 
 
533 aa  277  3e-73  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
538 aa  276  8e-73  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
538 aa  273  4.0000000000000004e-72  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  38.65 
 
 
533 aa  270  5.9999999999999995e-71  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  47.84 
 
 
542 aa  267  4e-70  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  39.56 
 
 
522 aa  265  1e-69  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  41.56 
 
 
543 aa  264  4e-69  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  44.09 
 
 
538 aa  259  6e-68  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
623 aa  258  2e-67  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  53.14 
 
 
544 aa  258  2e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
538 aa  256  6e-67  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
545 aa  256  9e-67  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  36.95 
 
 
526 aa  255  2.0000000000000002e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  38.46 
 
 
562 aa  254  2.0000000000000002e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  38.33 
 
 
540 aa  255  2.0000000000000002e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  45.51 
 
 
394 aa  251  2e-65  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  51.42 
 
 
538 aa  249  1e-64  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
550 aa  247  3e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
537 aa  245  9.999999999999999e-64  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  56.02 
 
 
1150 aa  246  9.999999999999999e-64  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
523 aa  244  3.9999999999999997e-63  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  48.9 
 
 
528 aa  243  5e-63  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  42.13 
 
 
546 aa  242  1e-62  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
535 aa  241  2e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  40.81 
 
 
542 aa  241  2e-62  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  46.37 
 
 
904 aa  241  2e-62  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  37.1 
 
 
529 aa  241  2.9999999999999997e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  38.61 
 
 
531 aa  238  3e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  50.16 
 
 
540 aa  234  3e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
531 aa  233  5e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  45.66 
 
 
547 aa  231  2e-59  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  49.68 
 
 
536 aa  232  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
524 aa  231  2e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  36.99 
 
 
530 aa  231  2e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
702 aa  228  3e-58  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  43.39 
 
 
347 aa  227  4e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  47.32 
 
 
530 aa  224  2e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  41.48 
 
 
535 aa  224  2e-57  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  36.06 
 
 
540 aa  224  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  46.71 
 
 
407 aa  224  4e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
545 aa  221  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  47.32 
 
 
858 aa  221  1.9999999999999999e-56  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
715 aa  220  3.9999999999999997e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  45.11 
 
 
535 aa  215  1.9999999999999998e-54  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0127  methyl-accepting chemotaxis sensory transducer  44.97 
 
 
397 aa  205  2e-51  Acidothermus cellulolyticus 11B  Bacteria  normal  0.362921  normal 
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
544 aa  204  2e-51  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
539 aa  200  6e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_008699  Noca_1783  chemotaxis sensory transducer  45.65 
 
 
515 aa  197  5.000000000000001e-49  Nocardioides sp. JS614  Bacteria  normal  0.552405  n/a   
 
 
-
 
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  43.37 
 
 
583 aa  191  2.9999999999999997e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  50.68 
 
 
965 aa  188  2e-46  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
565 aa  186  7e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  32.21 
 
 
562 aa  186  9e-46  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  44.31 
 
 
563 aa  186  1.0000000000000001e-45  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  38.66 
 
 
586 aa  184  5.0000000000000004e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
686 aa  183  6e-45  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.1 
 
 
533 aa  183  7e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_007643  Rru_A2460  chemotaxis sensory transducer  37.95 
 
 
565 aa  182  1e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
741 aa  182  1e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
535 aa  181  2e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  42.63 
 
 
657 aa  181  2.9999999999999997e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
566 aa  181  2.9999999999999997e-44  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  32.59 
 
 
561 aa  181  4e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
730 aa  179  9e-44  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4789  methyl-accepting chemotaxis sensory transducer  48.89 
 
 
493 aa  179  1e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0753  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
558 aa  178  2e-43  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.75846  n/a   
 
 
-
 
NC_013173  Dbac_0250  methyl-accepting chemotaxis sensory transducer  33.5 
 
 
554 aa  178  2e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000234986  n/a   
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.56 
 
 
574 aa  177  4e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_009664  Krad_0344  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
529 aa  177  6e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.363581  normal 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  37.83 
 
 
562 aa  176  7e-43  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2646  methyl-accepting chemotaxis sensory transducer  32.69 
 
 
625 aa  176  8e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
562 aa  176  9e-43  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  35.77 
 
 
566 aa  175  1.9999999999999998e-42  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  35.43 
 
 
676 aa  174  2.9999999999999996e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  41.26 
 
 
561 aa  174  3.9999999999999995e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
561 aa  174  5e-42  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
730 aa  173  6.999999999999999e-42  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
562 aa  173  9e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  33.33 
 
 
563 aa  172  1e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_20550  methyl-accepting chemotaxis protein  38.02 
 
 
733 aa  172  1e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.375054  normal  0.44591 
 
 
-
 
NC_010172  Mext_3616  chemotaxis sensory transducer  45.63 
 
 
305 aa  172  2e-41  Methylobacterium extorquens PA1  Bacteria  normal  0.460138  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  38.33 
 
 
602 aa  171  2e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
562 aa  172  2e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
731 aa  171  3e-41  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  39.04 
 
 
559 aa  170  5e-41  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
449 aa  170  5e-41  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.06 
 
 
574 aa  170  5e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  43.53 
 
 
560 aa  170  6e-41  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  28.06 
 
 
539 aa  170  7e-41  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  37.72 
 
 
697 aa  169  9e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3533  methyl-accepting chemotaxis sensory transducer  35.33 
 
 
560 aa  169  1e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.515868  normal 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  44.31 
 
 
561 aa  169  1e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
563 aa  169  1e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
565 aa  169  1e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  43.37 
 
 
694 aa  168  2e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.51 
 
 
650 aa  169  2e-40  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
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