More than 300 homologs were found in PanDaTox collection
for query gene Amir_0097 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  100 
 
 
209 aa  409  1e-113  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  71.63 
 
 
214 aa  291  4e-78  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  64.53 
 
 
225 aa  243  2e-63  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.665179 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  61.54 
 
 
231 aa  242  3e-63  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  60.49 
 
 
221 aa  240  1e-62  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  58.54 
 
 
212 aa  240  1e-62  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  58.74 
 
 
233 aa  240  1e-62  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  59.22 
 
 
231 aa  239  3e-62  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  60.61 
 
 
213 aa  238  5e-62  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  57.56 
 
 
212 aa  237  1e-61  Salinispora tropica CNB-440  Bacteria  normal  normal  0.967001 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  59.81 
 
 
219 aa  236  2e-61  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  56.1 
 
 
211 aa  235  3e-61  Frankia sp. EAN1pec  Bacteria  normal  normal  0.265588 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  56.59 
 
 
216 aa  234  8e-61  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  60.4 
 
 
239 aa  232  2e-60  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.711047 
 
 
-
 
NC_013093  Amir_1910  two component transcriptional regulator, LuxR family  58.45 
 
 
218 aa  232  3e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  56.31 
 
 
224 aa  231  7e-60  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  59.09 
 
 
214 aa  229  3e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal 
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  58.85 
 
 
223 aa  226  2e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  56.57 
 
 
226 aa  226  2e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1427  two component LuxR family transcriptional regulator  55.77 
 
 
212 aa  225  4e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  55.61 
 
 
233 aa  224  6e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0277195 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  56 
 
 
219 aa  224  9e-58  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  54.33 
 
 
216 aa  224  9e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_013093  Amir_6098  two component transcriptional regulator, LuxR family  58.02 
 
 
218 aa  222  4e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  53.4 
 
 
218 aa  221  5e-57  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  53.14 
 
 
213 aa  220  2e-56  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  57.07 
 
 
208 aa  220  2e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  54.95 
 
 
217 aa  217  8e-56  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  59.3 
 
 
216 aa  217  1e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  55.34 
 
 
223 aa  215  3e-55  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_3035  LuxR response regulator receiver  57.07 
 
 
223 aa  214  6e-55  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3097  two component transcriptional regulator, LuxR family  57.43 
 
 
222 aa  214  8e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.472018  normal  0.507317 
 
 
-
 
NC_008146  Mmcs_4126  two component LuxR family transcriptional regulator  52.88 
 
 
220 aa  213  2e-54  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  53.17 
 
 
254 aa  213  2e-54  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  52.43 
 
 
216 aa  213  2e-54  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_009077  Mjls_4357  two component LuxR family transcriptional regulator  52.88 
 
 
215 aa  213  2e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.171113 
 
 
-
 
NC_008705  Mkms_4201  two component LuxR family transcriptional regulator  52.88 
 
 
215 aa  213  2e-54  Mycobacterium sp. KMS  Bacteria  normal  0.180608  normal 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  52.66 
 
 
216 aa  212  3e-54  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  52.43 
 
 
244 aa  211  5e-54  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_009077  Mjls_1103  two component LuxR family transcriptional regulator  53.77 
 
 
228 aa  204  5e-52  Mycobacterium sp. JLS  Bacteria  normal  0.191898  normal 
 
 
-
 
NC_008146  Mmcs_1076  two component LuxR family transcriptional regulator  53.77 
 
 
228 aa  204  5e-52  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1092  two component LuxR family transcriptional regulator  53.77 
 
 
228 aa  204  5e-52  Mycobacterium sp. KMS  Bacteria  normal  0.123414  normal  0.110897 
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  47.6 
 
 
226 aa  204  1e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  7.64485e-09 
 
 
-
 
NC_013441  Gbro_2140  response regulator receiver  55.12 
 
 
218 aa  200  1e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  0.95288  n/a   
 
 
-
 
NC_008726  Mvan_2548  two component LuxR family transcriptional regulator  55.5 
 
 
216 aa  198  6e-50  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.971783  normal 
 
 
-
 
NC_013757  Gobs_4820  two component transcriptional regulator, LuxR family  58.5 
 
 
218 aa  194  8e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2290  two component transcriptional regulator, LuxR family  53.96 
 
 
208 aa  189  2e-47  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.00802134  hitchhiker  0.000628596 
 
 
-
 
NC_013174  Jden_1659  two component transcriptional regulator, LuxR family  51.98 
 
 
207 aa  185  4e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  0.319135  normal  0.0403017 
 
 
-
 
NC_013521  Sked_11330  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.43 
 
 
224 aa  184  7e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0103975 
 
 
-
 
NC_010571  Oter_0647  two component LuxR family transcriptional regulator  42.72 
 
 
225 aa  165  5e-40  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3459  two component LuxR family transcriptional regulator  47.69 
 
 
212 aa  163  1e-39  Arthrobacter sp. FB24  Bacteria  normal  0.775478  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  45.5 
 
 
218 aa  163  1e-39  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  46.19 
 
 
219 aa  163  2e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  40.85 
 
 
242 aa  162  3e-39  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  45.67 
 
 
220 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.04 
 
 
226 aa  160  2e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  45.02 
 
 
217 aa  159  3e-38  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  43.2 
 
 
207 aa  158  4e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  46.83 
 
 
220 aa  158  4e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  40.38 
 
 
222 aa  157  9e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  40.1 
 
 
217 aa  157  1e-37  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  43 
 
 
221 aa  157  1e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  2.10563e-05  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  45.66 
 
 
226 aa  157  2e-37  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  44.34 
 
 
221 aa  156  2e-37  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  45.5 
 
 
220 aa  156  2e-37  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_010718  Nther_0692  two component transcriptional regulator, LuxR family  40.1 
 
 
213 aa  156  2e-37  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  43.87 
 
 
225 aa  155  3e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  45.21 
 
 
227 aa  155  4e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  39.91 
 
 
215 aa  155  4e-37  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  41.23 
 
 
220 aa  155  5e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  43.6 
 
 
213 aa  154  7e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  39.91 
 
 
215 aa  154  8e-37  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  38.83 
 
 
213 aa  154  1e-36  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  40.76 
 
 
253 aa  153  2e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  39.32 
 
 
220 aa  152  2e-36  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  45 
 
 
229 aa  153  2e-36  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_18340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.16 
 
 
209 aa  153  2e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  38.57 
 
 
224 aa  153  2e-36  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  41.75 
 
 
210 aa  152  3e-36  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  41.75 
 
 
210 aa  152  3e-36  Bacillus cereus AH187  Bacteria  unclonable  1.36266e-09  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  43.75 
 
 
209 aa  152  3e-36  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  41.75 
 
 
210 aa  152  3e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  5.38049e-05  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  41.67 
 
 
219 aa  152  3e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  41.75 
 
 
210 aa  152  3e-36  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  4.40829e-05  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  38.97 
 
 
215 aa  152  3e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  38.5 
 
 
215 aa  152  3e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  41.75 
 
 
210 aa  152  3e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  41.75 
 
 
210 aa  152  3e-36  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  9.42452e-08  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  42.93 
 
 
214 aa  152  3e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  41.75 
 
 
210 aa  152  4e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  39.9 
 
 
204 aa  152  4e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  41.75 
 
 
210 aa  152  4e-36  Bacillus cereus B4264  Bacteria  unclonable  1.74821e-05  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  43.2 
 
 
227 aa  152  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  38.97 
 
 
215 aa  152  4e-36  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  41.26 
 
 
210 aa  152  5e-36  Bacillus cereus G9842  Bacteria  decreased coverage  3.08683e-08  hitchhiker  3.50245e-10 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  41.55 
 
 
225 aa  152  5e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_005957  BT9727_5091  response regulator  39.44 
 
 
215 aa  152  5e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  39.44 
 
 
215 aa  152  5e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  39.44 
 
 
215 aa  152  5e-36  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  39.44 
 
 
215 aa  152  5e-36  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
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