4 homologs were found in PanDaTox collection
for query gene Amir_0094 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0094  TIR protein  100 
 
 
342 aa  670  Actinosynnema mirum DSM 43827  Bacteria  normal  0.127625  n/a   
 
 
-
 
NC_009921  Franean1_4259  hypothetical protein  28.14 
 
 
847 aa  56.6  5e-07  Frankia sp. EAN1pec  Bacteria  normal  0.178114  normal  0.177218 
 
 
-
 
NC_009921  Franean1_6381  hypothetical protein  35.14 
 
 
414 aa  55.5  1e-06  Frankia sp. EAN1pec  Bacteria  normal  normal  0.381566 
 
 
-
 
NC_011059  Paes_2024  TIR protein  27.52 
 
 
163 aa  47.4  0.0004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0554367 
 
 
-
 
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