9 homologs were found in PanDaTox collection
for query gene Amir_0075 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0075  hypothetical protein  100 
 
 
302 aa  566  1e-160  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_00910  hypothetical protein  49.22 
 
 
314 aa  214  1e-54  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0214  hypothetical protein  36.07 
 
 
318 aa  81.3  2e-14  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5041  hypothetical protein  30.6 
 
 
342 aa  65.5  1e-09  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5129  hypothetical protein  30.6 
 
 
342 aa  65.5  1e-09  Mycobacterium sp. KMS  Bacteria  normal  normal  0.757995 
 
 
-
 
NC_009077  Mjls_5421  hypothetical protein  30.17 
 
 
342 aa  57.4  3e-07  Mycobacterium sp. JLS  Bacteria  normal  0.384708  normal  0.699541 
 
 
-
 
NC_014158  Tpau_0132  hypothetical protein  29.06 
 
 
278 aa  53.5  4e-06  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.461978  n/a   
 
 
-
 
NC_008726  Mvan_5668  hypothetical protein  31.4 
 
 
339 aa  49.3  7e-05  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.520717  hitchhiker  0.00592197 
 
 
-
 
NC_009338  Mflv_1139  hypothetical protein  31.76 
 
 
331 aa  42.4  0.009  Mycobacterium gilvum PYR-GCK  Bacteria  decreased coverage  0.00064964  normal  0.257581 
 
 
-
 
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