4 homologs were found in PanDaTox collection
for query gene Amir_0056 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0056  hypothetical protein  100 
 
 
401 aa  791  Actinosynnema mirum DSM 43827  Bacteria  normal  0.227027  n/a   
 
 
-
 
NC_013159  Svir_00780  Flagellar basal body-associated protein FliL  32.43 
 
 
437 aa  132  8e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.482068  normal 
 
 
-
 
NC_013159  Svir_00790  hypothetical protein  33.59 
 
 
192 aa  48.1  0.0003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.293947  normal 
 
 
-
 
NC_013093  Amir_0701  RDD domain containing protein  50.63 
 
 
373 aa  46.6  0.0007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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