More than 300 homologs were found in PanDaTox collection
for query gene Ajs_0011 on replicon NC_008782
Organism: Acidovorax sp. JS42



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  100 
 
 
214 aa  427  1e-119  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  100 
 
 
214 aa  427  1e-119  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  79.81 
 
 
218 aa  337  5.9999999999999996e-92  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  80.88 
 
 
210 aa  332  2e-90  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  80.39 
 
 
210 aa  330  1e-89  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_010002  Daci_2921  two component LuxR family transcriptional regulator  88.04 
 
 
229 aa  327  1.0000000000000001e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.190475 
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  75.12 
 
 
216 aa  314  8e-85  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  54.55 
 
 
215 aa  219  3.9999999999999997e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  54.55 
 
 
215 aa  216  2e-55  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  53.74 
 
 
217 aa  213  1.9999999999999998e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  53.74 
 
 
217 aa  213  1.9999999999999998e-54  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  49.52 
 
 
221 aa  209  3e-53  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  50.47 
 
 
216 aa  207  9e-53  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00000000317123 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  51.2 
 
 
220 aa  207  9e-53  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  50.47 
 
 
216 aa  205  4e-52  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000136895 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  51.5 
 
 
221 aa  204  8e-52  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  51.92 
 
 
215 aa  204  9e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  51.92 
 
 
215 aa  204  9e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  52 
 
 
221 aa  204  9e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  49.53 
 
 
216 aa  202  2e-51  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0994806 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  49.53 
 
 
216 aa  202  2e-51  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  50.47 
 
 
216 aa  201  9e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.192356 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  50.95 
 
 
238 aa  198  6e-50  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  49.52 
 
 
219 aa  194  1e-48  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  48.33 
 
 
219 aa  192  3e-48  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  47.37 
 
 
219 aa  190  1e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.001499 
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  48.34 
 
 
220 aa  190  2e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  47.52 
 
 
209 aa  189  2e-47  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  45.5 
 
 
223 aa  189  2e-47  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.211294 
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  47.87 
 
 
222 aa  189  4e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  45.02 
 
 
227 aa  188  4e-47  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  49.75 
 
 
224 aa  189  4e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  47.22 
 
 
219 aa  188  5e-47  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  48.57 
 
 
220 aa  188  5e-47  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  47.37 
 
 
220 aa  187  9e-47  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  48.57 
 
 
220 aa  187  9e-47  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  47.62 
 
 
220 aa  187  9e-47  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  49.05 
 
 
220 aa  187  1e-46  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  47.85 
 
 
220 aa  187  1e-46  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  47.85 
 
 
220 aa  187  1e-46  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  49.05 
 
 
220 aa  187  1e-46  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  46.92 
 
 
221 aa  186  2e-46  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  45.1 
 
 
223 aa  186  2e-46  Shewanella sp. MR-7  Bacteria  normal  normal  0.358413 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  45.1 
 
 
223 aa  186  2e-46  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  48.29 
 
 
224 aa  185  4e-46  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  43.87 
 
 
223 aa  185  4e-46  Shewanella sp. MR-4  Bacteria  normal  normal  0.335218 
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  47.32 
 
 
211 aa  185  6e-46  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  42.79 
 
 
212 aa  184  8e-46  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  45.54 
 
 
220 aa  184  1.0000000000000001e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  45.85 
 
 
213 aa  181  6e-45  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  43.75 
 
 
219 aa  181  7e-45  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  45.81 
 
 
209 aa  179  2e-44  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0584  two component response regulator  45.59 
 
 
215 aa  175  4e-43  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_011312  VSAL_I2824  transcriptional regulator, LuxR response regulator receiver  43.63 
 
 
209 aa  175  4e-43  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2614  two component LuxR family transcriptional regulator  43.96 
 
 
222 aa  175  5e-43  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  49.75 
 
 
224 aa  175  5e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0588074 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  49.75 
 
 
224 aa  174  7e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal 
 
 
-
 
NC_003910  CPS_0937  LuxR family DNA-binding response regulator  43.72 
 
 
223 aa  174  9.999999999999999e-43  Colwellia psychrerythraea 34H  Bacteria  normal  0.715087  n/a   
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  49.25 
 
 
225 aa  174  9.999999999999999e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  47.78 
 
 
223 aa  172  2.9999999999999996e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  45.71 
 
 
215 aa  172  2.9999999999999996e-42  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal 
 
 
-
 
NC_008254  Meso_0091  two component LuxR family transcriptional regulator  48.8 
 
 
218 aa  169  2e-41  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  47.74 
 
 
231 aa  168  5e-41  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  44.55 
 
 
224 aa  167  1e-40  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal 
 
 
-
 
NC_011138  MADE_00712  putative regulator in two-component regulatory system ; LuxR family protein  45.71 
 
 
214 aa  166  2e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.169527  n/a   
 
 
-
 
NC_011369  Rleg2_0190  two component transcriptional regulator, LuxR family  46.57 
 
 
215 aa  165  4e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  42.23 
 
 
211 aa  165  4e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0522  two component LuxR family transcriptional regulator  45.07 
 
 
219 aa  165  5.9999999999999996e-40  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3140  two component LuxR family transcriptional regulator  41.43 
 
 
220 aa  164  6.9999999999999995e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  0.803361  normal  0.270175 
 
 
-
 
NC_008345  Sfri_1828  two component transcriptional regulator, LuxR family protein  45.23 
 
 
216 aa  164  8e-40  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  43.06 
 
 
251 aa  162  4.0000000000000004e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  44.93 
 
 
214 aa  161  6e-39  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_012850  Rleg_0219  two component transcriptional regulator, LuxR family  46.08 
 
 
215 aa  161  7e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.463895 
 
 
-
 
NC_011138  MADE_02260  Response regulator, LuxR family (CheY, HTH domains)  40.19 
 
 
222 aa  160  2e-38  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  42.92 
 
 
219 aa  159  3e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  41.63 
 
 
251 aa  157  1e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  44.44 
 
 
213 aa  156  2e-37  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  43.96 
 
 
213 aa  156  2e-37  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_003910  CPS_3420  LuxR family DNA-binding response regulator  43.07 
 
 
216 aa  155  6e-37  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  41.06 
 
 
241 aa  149  3e-35  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0133592 
 
 
-
 
NC_010172  Mext_4220  response regulator receiver  42.08 
 
 
244 aa  147  1.0000000000000001e-34  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.89842 
 
 
-
 
NC_011757  Mchl_4590  two component transcriptional regulator, LuxR family  42.08 
 
 
244 aa  147  1.0000000000000001e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.590508  normal  0.147521 
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  37.93 
 
 
218 aa  143  2e-33  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  38.97 
 
 
217 aa  142  4e-33  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal 
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  39.32 
 
 
219 aa  139  1.9999999999999998e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  37.38 
 
 
229 aa  137  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  38.61 
 
 
218 aa  133  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_004347  SO_3305  LuxR family DNA-binding response regulator  38.83 
 
 
206 aa  132  3e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  39.9 
 
 
221 aa  132  3.9999999999999996e-30  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  38.69 
 
 
252 aa  131  6.999999999999999e-30  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  34.98 
 
 
219 aa  131  7.999999999999999e-30  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  38.71 
 
 
221 aa  131  9e-30  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  39.41 
 
 
221 aa  130  1.0000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal 
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  39.41 
 
 
221 aa  130  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  normal  0.548338  normal 
 
 
-
 
NC_011662  Tmz1t_3355  two component transcriptional regulator, LuxR family  38.73 
 
 
208 aa  130  2.0000000000000002e-29  Thauera sp. MZ1T  Bacteria  normal  0.687232  n/a   
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  38.92 
 
 
221 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  39.9 
 
 
221 aa  129  3e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  40.78 
 
 
221 aa  129  3e-29  Pseudomonas putida GB-1  Bacteria  normal  normal  0.892266 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  37.37 
 
 
209 aa  128  7.000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2626  two component LuxR family transcriptional regulator  39.32 
 
 
207 aa  127  9.000000000000001e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.390788  n/a   
 
 
-
 
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