More than 300 homologs were found in PanDaTox collection
for query gene Acry_1727 on replicon NC_009484
Organism: Acidiphilium cryptum JF-5



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009484  Acry_1727  short-chain dehydrogenase/reductase SDR  100 
 
 
265 aa  523  1e-147  Acidiphilium cryptum JF-5  Bacteria  normal  0.218017  n/a   
 
 
-
 
NC_011989  Avi_0085  gluconate 5-dehydrogenase  51.15 
 
 
256 aa  213  3.9999999999999995e-54  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1619  short-chain dehydrogenase/reductase SDR  46.4 
 
 
277 aa  203  3e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.44916 
 
 
-
 
NC_011369  Rleg2_1440  short-chain dehydrogenase/reductase SDR  45.42 
 
 
277 aa  201  7e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.313918 
 
 
-
 
NC_011901  Tgr7_1398  short-chain dehydrogenase/reductase SDR  46.53 
 
 
249 aa  201  9e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.646056  n/a   
 
 
-
 
NC_010581  Bind_1222  short-chain dehydrogenase/reductase SDR  46.34 
 
 
258 aa  196  3e-49  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.461582  normal 
 
 
-
 
NC_007643  Rru_A0729  Short-chain dehydrogenase/reductase SDR  46.18 
 
 
259 aa  189  2.9999999999999997e-47  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.503076  n/a   
 
 
-
 
NC_008781  Pnap_1455  short-chain dehydrogenase/reductase SDR  43.9 
 
 
260 aa  187  1e-46  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.271159  normal 
 
 
-
 
NC_009636  Smed_1362  short-chain dehydrogenase/reductase SDR  43.32 
 
 
282 aa  184  1.0000000000000001e-45  Sinorhizobium medicae WSM419  Bacteria  normal  0.390824  normal 
 
 
-
 
NC_010524  Lcho_0468  short-chain dehydrogenase/reductase SDR  41.39 
 
 
257 aa  178  8e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013422  Hneap_1889  short-chain dehydrogenase/reductase SDR  39 
 
 
256 aa  172  6.999999999999999e-42  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1974  short-chain dehydrogenase/reductase SDR  39.09 
 
 
258 aa  172  6.999999999999999e-42  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2964  short-chain dehydrogenase/reductase SDR  41.06 
 
 
260 aa  170  3e-41  Acidovorax sp. JS42  Bacteria  normal  normal  0.166977 
 
 
-
 
NC_011992  Dtpsy_2391  short-chain dehydrogenase/reductase SDR  40.65 
 
 
260 aa  169  5e-41  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0375  short-chain dehydrogenase/reductase SDR  42.98 
 
 
254 aa  160  2e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  0.187579 
 
 
-
 
NC_009952  Dshi_0371  short-chain dehydrogenase/reductase SDR  36.71 
 
 
243 aa  154  2e-36  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1484  short-chain dehydrogenase/reductase SDR  36.89 
 
 
260 aa  152  7e-36  Marinobacter aquaeolei VT8  Bacteria  normal  0.591298  n/a   
 
 
-
 
NC_011662  Tmz1t_1059  short-chain dehydrogenase/reductase SDR  38.13 
 
 
300 aa  150  3e-35  Thauera sp. MZ1T  Bacteria  normal  0.261261  n/a   
 
 
-
 
NC_008825  Mpe_A0230  hypothetical protein  37.5 
 
 
261 aa  148  7e-35  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.599536 
 
 
-
 
NC_007963  Csal_0463  short-chain dehydrogenase/reductase SDR  40.78 
 
 
264 aa  148  1.0000000000000001e-34  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6102  Short-chain dehydrogenase/reductase SDR  40.08 
 
 
264 aa  146  3e-34  Ralstonia eutropha JMP134  Bacteria  normal  0.0605001  n/a   
 
 
-
 
NC_010002  Daci_5880  short-chain dehydrogenase/reductase SDR  39.09 
 
 
263 aa  146  3e-34  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.195504 
 
 
-
 
NC_010002  Daci_6048  short chain dehydrogenase  36.82 
 
 
266 aa  145  9e-34  Delftia acidovorans SPH-1  Bacteria  normal  0.549002  normal 
 
 
-
 
NC_007493  RSP_1087  short-chain dehydrogenase/reductase family protein  35.71 
 
 
245 aa  144  1e-33  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.3765  n/a   
 
 
-
 
NC_009049  Rsph17029_2750  short-chain dehydrogenase/reductase SDR  35.71 
 
 
245 aa  144  1e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0379321  normal 
 
 
-
 
NC_011992  Dtpsy_3487  short chain dehydrogenase  39.59 
 
 
270 aa  144  2e-33  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0813  short chain dehydrogenase/reductase family oxidoreductase  40 
 
 
253 aa  144  2e-33  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  34.05 
 
 
242 aa  142  5e-33  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4895  short chain dehydrogenase  38.08 
 
 
258 aa  142  6e-33  Polaromonas sp. JS666  Bacteria  hitchhiker  0.000739396  normal 
 
 
-
 
NC_007492  Pfl01_4738  Short-chain dehydrogenase/reductase SDR  38.6 
 
 
260 aa  141  9.999999999999999e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.9226  normal  0.284155 
 
 
-
 
NC_008782  Ajs_4129  short chain dehydrogenase  38.78 
 
 
270 aa  140  1.9999999999999998e-32  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4073  short-chain dehydrogenase/reductase SDR  36.6 
 
 
252 aa  140  1.9999999999999998e-32  Marinomonas sp. MWYL1  Bacteria  normal  0.576341  normal 
 
 
-
 
NC_012791  Vapar_5291  short chain dehydrogenase  37.13 
 
 
260 aa  140  3e-32  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0959  Short-chain dehydrogenase/reductase SDR  35.06 
 
 
262 aa  140  3e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01434  Short chain dehydrogenase family protein  35.37 
 
 
239 aa  140  3e-32  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2941  short-chain dehydrogenase/reductase SDR  33.61 
 
 
245 aa  137  1e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.19024  normal  0.201158 
 
 
-
 
NC_007643  Rru_A0427  Short-chain dehydrogenase/reductase SDR  41.32 
 
 
256 aa  138  1e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2775  short-chain dehydrogenase/reductase SDR  36.51 
 
 
238 aa  137  2e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  0.88847  normal  0.739494 
 
 
-
 
NC_009438  Sputcn32_2712  short-chain dehydrogenase/reductase SDR  38.82 
 
 
275 aa  137  2e-31  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1167  short-chain dehydrogenase/reductase SDR  37.5 
 
 
266 aa  137  2e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1238  short-chain dehydrogenase/reductase SDR  37.5 
 
 
266 aa  137  2e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1168  short-chain dehydrogenase/reductase SDR  37.8 
 
 
266 aa  137  3.0000000000000003e-31  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_4017  short-chain dehydrogenase/reductase SDR  33.19 
 
 
245 aa  134  9.999999999999999e-31  Jannaschia sp. CCS1  Bacteria  normal  0.980517  normal 
 
 
-
 
NC_008709  Ping_1000  short-chain dehydrogenase/reductase SDR  35.8 
 
 
240 aa  134  1.9999999999999998e-30  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3172  short-chain dehydrogenase/reductase SDR  36.52 
 
 
250 aa  133  3.9999999999999996e-30  Pseudomonas putida W619  Bacteria  normal  0.0471693  normal 
 
 
-
 
NC_007298  Daro_0496  Short-chain dehydrogenase/reductase SDR  36.59 
 
 
251 aa  132  6e-30  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.661007 
 
 
-
 
NC_004578  PSPTO_1119  oxidoreductase, short chain dehydrogenase/reductase family  35.89 
 
 
262 aa  132  7.999999999999999e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1069  short-chain dehydrogenase/reductase SDR  36.96 
 
 
251 aa  131  1.0000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1311  short-chain dehydrogenase/reductase SDR  34.66 
 
 
266 aa  131  1.0000000000000001e-29  Shewanella baltica OS223  Bacteria  normal  normal  0.978372 
 
 
-
 
NC_010322  PputGB1_2099  short-chain dehydrogenase/reductase SDR  38.26 
 
 
250 aa  130  2.0000000000000002e-29  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3052  short-chain dehydrogenase/reductase SDR  34.66 
 
 
266 aa  129  3e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0130  short chain dehydrogenase  33.71 
 
 
265 aa  129  4.0000000000000003e-29  Ralstonia eutropha JMP134  Bacteria  normal  0.727225  n/a   
 
 
-
 
NC_009997  Sbal195_3209  short-chain dehydrogenase/reductase SDR  34.66 
 
 
266 aa  129  4.0000000000000003e-29  Shewanella baltica OS195  Bacteria  normal  normal  0.857449 
 
 
-
 
NC_009665  Shew185_3066  short-chain dehydrogenase/reductase SDR  34.66 
 
 
266 aa  129  4.0000000000000003e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2097  short-chain dehydrogenase/reductase SDR  37.3 
 
 
238 aa  129  6e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.434652  n/a   
 
 
-
 
NC_008044  TM1040_0408  short-chain dehydrogenase/reductase SDR  37.12 
 
 
240 aa  129  6e-29  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3382  short chain dehydrogenase/reductase family oxidoreductase  34.29 
 
 
266 aa  127  1.0000000000000001e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_1490  short-chain dehydrogenase/reductase SDR  37.99 
 
 
239 aa  127  2.0000000000000002e-28  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2469  TonB-dependent receptor  35.25 
 
 
265 aa  127  2.0000000000000002e-28  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1220  short-chain dehydrogenase/reductase SDR  40.17 
 
 
267 aa  127  2.0000000000000002e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0396452 
 
 
-
 
NC_009092  Shew_1481  short-chain dehydrogenase/reductase SDR  35.12 
 
 
240 aa  126  3e-28  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2737  short chain dehydrogenase/reductase family oxidoreductase  38.7 
 
 
250 aa  125  5e-28  Pseudomonas putida KT2440  Bacteria  normal  0.420132  normal 
 
 
-
 
NC_012912  Dd1591_1178  short-chain dehydrogenase/reductase SDR  36.24 
 
 
239 aa  126  5e-28  Dickeya zeae Ech1591  Bacteria  normal  0.300792  n/a   
 
 
-
 
NC_011761  AFE_3307  short chain dehydrogenase  37.45 
 
 
261 aa  125  6e-28  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0864591  n/a   
 
 
-
 
NC_011206  Lferr_2904  short chain dehydrogenase  37.45 
 
 
261 aa  125  6e-28  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.000166666  decreased coverage  0.000436169 
 
 
-
 
NC_010524  Lcho_0185  short chain dehydrogenase  35.98 
 
 
267 aa  125  8.000000000000001e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007614  Nmul_A2453  short chain dehydrogenase  34.71 
 
 
261 aa  125  9e-28  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0286  short-chain dehydrogenase/reductase SDR  38.46 
 
 
267 aa  124  1e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3016  short-chain dehydrogenase/reductase SDR  37.39 
 
 
250 aa  124  2e-27  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3806  short chain dehydrogenase  34.57 
 
 
260 aa  123  3e-27  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.187681 
 
 
-
 
NC_008345  Sfri_3034  short-chain dehydrogenase/reductase SDR  35.29 
 
 
249 aa  122  8e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.377805  n/a   
 
 
-
 
NC_007947  Mfla_2676  short chain dehydrogenase  35.02 
 
 
264 aa  121  9.999999999999999e-27  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.989358 
 
 
-
 
NC_007954  Sden_3371  short-chain dehydrogenase/reductase SDR  33.74 
 
 
239 aa  120  1.9999999999999998e-26  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0727  short-chain dehydrogenase/reductase SDR  34.33 
 
 
245 aa  120  3e-26  Psychrobacter cryohalolentis K5  Bacteria  decreased coverage  0.00978147  normal 
 
 
-
 
NC_010084  Bmul_2618  short-chain dehydrogenase/reductase SDR  37.5 
 
 
260 aa  119  3.9999999999999996e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3863  short chain dehydrogenase  35.39 
 
 
260 aa  119  6e-26  Dechloromonas aromatica RCB  Bacteria  normal  0.331172  normal 
 
 
-
 
NC_008786  Veis_0151  short chain dehydrogenase  35.27 
 
 
261 aa  119  7e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0099  short chain dehydrogenase  33.47 
 
 
265 aa  118  9e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4782  short chain dehydrogenase  36.48 
 
 
264 aa  118  9.999999999999999e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1537  short-chain dehydrogenase/reductase SDR  34.02 
 
 
255 aa  118  9.999999999999999e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0470  short chain dehydrogenase  33.33 
 
 
259 aa  115  6.9999999999999995e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.382263 
 
 
-
 
NC_010622  Bphy_0185  short chain dehydrogenase  36.55 
 
 
256 aa  114  1.0000000000000001e-24  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1917  short chain dehydrogenase  31.13 
 
 
275 aa  114  2.0000000000000002e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0637  short chain dehydrogenase  33.75 
 
 
241 aa  113  3e-24  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000368636  n/a   
 
 
-
 
NC_007951  Bxe_A4248  short chain dehydrogenase  32.9 
 
 
259 aa  113  4.0000000000000004e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.215124 
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  34.21 
 
 
266 aa  112  7.000000000000001e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2840  short chain dehydrogenase  35.77 
 
 
302 aa  112  8.000000000000001e-24  Nocardioides sp. JS614  Bacteria  normal  0.28747  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0537  short chain dehydrogenase/reductase family oxidoreductase  37.61 
 
 
262 aa  111  9e-24  Burkholderia mallei SAVP1  Bacteria  normal  0.618923  n/a   
 
 
-
 
NC_006348  BMA2291  short chain dehydrogenase/reductase family oxidoreductase  37.61 
 
 
262 aa  111  9e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  0.448302  n/a   
 
 
-
 
NC_007434  BURPS1710b_3288  short chain dehydrogenase/reductase family oxidoreductase  37.61 
 
 
262 aa  111  9e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1063  short chain dehydrogenase/reductase family oxidoreductase  37.61 
 
 
262 aa  111  9e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0142  short chain dehydrogenase  34.78 
 
 
266 aa  112  9e-24  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_2168  short chain dehydrogenase/reductase family oxidoreductase  37.61 
 
 
262 aa  111  9e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.408948  n/a   
 
 
-
 
NC_009076  BURPS1106A_3273  short chain dehydrogenase/reductase family oxidoreductase  37.61 
 
 
262 aa  111  9e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0352  short chain dehydrogenase  37.81 
 
 
259 aa  111  1.0000000000000001e-23  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1329  short-chain dehydrogenase/reductase SDR  31.6 
 
 
238 aa  111  1.0000000000000001e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.371699  n/a   
 
 
-
 
NC_013456  VEA_003864  oxidoreductase short-chain dehydrogenase/reductase family  30.93 
 
 
241 aa  111  1.0000000000000001e-23  Vibrio sp. Ex25  Bacteria  normal  0.013707  n/a   
 
 
-
 
NC_009783  VIBHAR_01815  short chain dehydrogenase  34.04 
 
 
241 aa  111  1.0000000000000001e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007510  Bcep18194_A3871  Short-chain dehydrogenase/reductase SDR  36.52 
 
 
263 aa  110  2.0000000000000002e-23  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0749  short-chain dehydrogenase/reductase SDR  37.18 
 
 
261 aa  110  2.0000000000000002e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>