More than 300 homologs were found in PanDaTox collection
for query gene Acid345_1498 on replicon NC_008009
Organism: Candidatus Koribacter versatilis Ellin345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  100 
 
 
239 aa  484  1e-136  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_008009  Acid345_3455  Crp/FNR family transcriptional regulator  62.34 
 
 
237 aa  318  5e-86  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.063385 
 
 
-
 
NC_008009  Acid345_1499  cyclic nucleotide-binding protein  40.14 
 
 
165 aa  146  3e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.191417  normal  0.714483 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  28.11 
 
 
226 aa  112  6e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  30.13 
 
 
236 aa  103  2e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  29.25 
 
 
225 aa  103  4e-21  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  29.47 
 
 
226 aa  97.8  1e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  30.32 
 
 
229 aa  96.3  4e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  27.19 
 
 
226 aa  95.5  6e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  25.82 
 
 
225 aa  95.1  9e-19  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  30.32 
 
 
231 aa  94  2e-18  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  27.08 
 
 
227 aa  92.8  4e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  27.14 
 
 
227 aa  92.4  5e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  26.54 
 
 
219 aa  92.4  6e-18  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.41 
 
 
225 aa  91.3  1e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  30.89 
 
 
232 aa  90.5  2e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  30.11 
 
 
235 aa  90.5  2e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  26.48 
 
 
243 aa  90.5  2e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  27.56 
 
 
243 aa  89  6e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_009441  Fjoh_2535  CRP/FNR family transcriptional regulator  28.3 
 
 
226 aa  88.6  7e-17  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  28.1 
 
 
217 aa  88.2  1e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  26.11 
 
 
239 aa  88.2  1e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011831  Cagg_0349  transcriptional regulator, Crp/Fnr family  26.85 
 
 
222 aa  87  2e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00000192919 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  30.81 
 
 
222 aa  87.4  2e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  29.26 
 
 
267 aa  86.7  3e-16  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  27.03 
 
 
227 aa  86.7  3e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  26.27 
 
 
226 aa  85.9  5e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  29.05 
 
 
225 aa  85.5  7e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013132  Cpin_4234  transcriptional regulator, Crp/Fnr family  26.94 
 
 
248 aa  85.5  7e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  26.91 
 
 
238 aa  85.5  7e-16  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  26.09 
 
 
236 aa  85.1  8e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  30.05 
 
 
354 aa  85.1  0.000000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  24.4 
 
 
224 aa  84.3  0.000000000000002  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  23.98 
 
 
223 aa  83.2  0.000000000000003  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.52 
 
 
236 aa  83.2  0.000000000000004  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.52 
 
 
236 aa  82.8  0.000000000000004  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  26.54 
 
 
251 aa  82.4  0.000000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  26.27 
 
 
229 aa  82.4  0.000000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  26.73 
 
 
228 aa  82.4  0.000000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  25.12 
 
 
248 aa  82  0.000000000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  28.23 
 
 
239 aa  82  0.000000000000008  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  26.24 
 
 
241 aa  81.3  0.00000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5506  Crp/FNR family transcriptional regulator  26.76 
 
 
246 aa  80.9  0.00000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.324567  normal  0.438631 
 
 
-
 
NC_009441  Fjoh_4447  CRP/FNR family transcriptional regulator  23.98 
 
 
227 aa  80.5  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  25 
 
 
229 aa  80.9  0.00000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  29.67 
 
 
226 aa  80.1  0.00000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  26.7 
 
 
231 aa  79.7  0.00000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_013730  Slin_1271  transcriptional regulator, Crp/Fnr family  25.7 
 
 
350 aa  79.7  0.00000000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  26.09 
 
 
218 aa  79.3  0.00000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  28.28 
 
 
225 aa  79.3  0.00000000000005  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  24.53 
 
 
232 aa  78.6  0.00000000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  26.74 
 
 
214 aa  78.6  0.00000000000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  25.65 
 
 
226 aa  78.6  0.00000000000009  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  25.89 
 
 
239 aa  78.6  0.00000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  24.64 
 
 
228 aa  78.2  0.0000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  26.39 
 
 
230 aa  77.8  0.0000000000001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  28.65 
 
 
223 aa  77.8  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  25.59 
 
 
224 aa  77.8  0.0000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_009511  Swit_3029  CRP/FNR family transcriptional regulator  25.68 
 
 
228 aa  77.8  0.0000000000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  25.11 
 
 
227 aa  77.8  0.0000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  26.86 
 
 
247 aa  77  0.0000000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_1697  transcriptional regulator, Crp/Fnr family  26.73 
 
 
259 aa  77.4  0.0000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.314621  hitchhiker  0.0000199045 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  25.46 
 
 
227 aa  77.8  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_1533  transcriptional regulator, Crp/Fnr family  26.07 
 
 
231 aa  77  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  24.46 
 
 
235 aa  77  0.0000000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  21.39 
 
 
232 aa  76.3  0.0000000000004  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  25.89 
 
 
239 aa  76.3  0.0000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  21.17 
 
 
232 aa  76.3  0.0000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  22.97 
 
 
229 aa  75.9  0.0000000000005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  24.78 
 
 
228 aa  75.9  0.0000000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  23.27 
 
 
231 aa  75.5  0.0000000000007  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  24.06 
 
 
224 aa  75.5  0.0000000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  22.77 
 
 
231 aa  75.5  0.0000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  23.27 
 
 
231 aa  75.5  0.0000000000007  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  25.89 
 
 
239 aa  75.5  0.0000000000008  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  24.23 
 
 
238 aa  75.1  0.0000000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  26.63 
 
 
237 aa  75.1  0.0000000000009  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  24.23 
 
 
238 aa  75.1  0.0000000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  24.55 
 
 
227 aa  74.7  0.000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.47 
 
 
225 aa  75.1  0.000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  26.32 
 
 
228 aa  74.7  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  25.13 
 
 
230 aa  74.3  0.000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  26.54 
 
 
225 aa  74.7  0.000000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  25.68 
 
 
236 aa  74.7  0.000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  26.67 
 
 
246 aa  73.9  0.000000000002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  24.77 
 
 
229 aa  73.9  0.000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  26.51 
 
 
225 aa  73.9  0.000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1622  Crp/FNR family transcriptional regulator  26.29 
 
 
259 aa  73.9  0.000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.366469  n/a   
 
 
-
 
NC_013595  Sros_8981  putative transcriptional regulator, Crp/Fnr family  26.44 
 
 
222 aa  73.9  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5556  transcriptional regulator, Crp/Fnr family  23.59 
 
 
352 aa  73.6  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487576  normal  0.0420739 
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  28.76 
 
 
249 aa  73.9  0.000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  20.9 
 
 
232 aa  73.6  0.000000000003  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  25.91 
 
 
225 aa  73.2  0.000000000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  25.24 
 
 
231 aa  73.6  0.000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  26.67 
 
 
230 aa  73.2  0.000000000003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  25.88 
 
 
228 aa  73.6  0.000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  27.27 
 
 
222 aa  73.2  0.000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  23.5 
 
 
228 aa  73.2  0.000000000004  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  26.67 
 
 
230 aa  72.4  0.000000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  26.67 
 
 
230 aa  72.8  0.000000000005  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
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