More than 300 homologs were found in PanDaTox collection
for query gene Acel_1019 on replicon NC_008578
Organism: Acidothermus cellulolyticus 11B



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008578  Acel_1019  nickel-dependent hydrogenase, large subunit  100 
 
 
431 aa  865    Acidothermus cellulolyticus 11B  Bacteria  normal  hitchhiker  0.00653003 
 
 
-
 
NC_013501  Rmar_2590  nickel-dependent hydrogenase large subunit  63.76 
 
 
433 aa  531  1e-150  Rhodothermus marinus DSM 4252  Bacteria  normal  0.282401  n/a   
 
 
-
 
NC_011884  Cyan7425_2660  Coenzyme F420 hydrogenase  55.63 
 
 
433 aa  498  1e-140  Cyanothece sp. PCC 7425  Bacteria  normal  0.041142  normal 
 
 
-
 
NC_010581  Bind_0507  nickel-dependent hydrogenase large subunit  58.35 
 
 
429 aa  496  1e-139  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1138  nickel-dependent hydrogenase large subunit  55.24 
 
 
431 aa  482  1e-135  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_4496  nickel-dependent hydrogenase, large subunit  57.45 
 
 
430 aa  475  1e-133  Frankia sp. CcI3  Bacteria  normal  0.401222  normal 
 
 
-
 
NC_012560  Avin_04400  Soluble nickel-dependent hydrogenase, large subunit, HoxH  58.57 
 
 
419 aa  475  1e-133  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4826  nickel-dependent hydrogenase large subunit  57.88 
 
 
428 aa  473  1e-132  Streptosporangium roseum DSM 43021  Bacteria  normal  0.106762  normal 
 
 
-
 
NC_009077  Mjls_3427  nickel-dependent hydrogenase, large subunit  58.84 
 
 
430 aa  470  1.0000000000000001e-131  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260108 
 
 
-
 
NC_008146  Mmcs_3416  nickel-dependent hydrogenase, large subunit  58.84 
 
 
430 aa  471  1.0000000000000001e-131  Mycobacterium sp. MCS  Bacteria  normal  0.291194  n/a   
 
 
-
 
NC_008705  Mkms_3479  nickel-dependent hydrogenase, large subunit  58.84 
 
 
430 aa  471  1.0000000000000001e-131  Mycobacterium sp. KMS  Bacteria  normal  0.441341  normal  0.0523033 
 
 
-
 
NC_014165  Tbis_1858  nickel-dependent hydrogenase large subunit  55.42 
 
 
428 aa  457  1e-127  Thermobispora bispora DSM 43833  Bacteria  normal  0.940457  normal 
 
 
-
 
NC_013947  Snas_3474  nickel-dependent hydrogenase large subunit  57.51 
 
 
432 aa  457  1e-127  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.455292  normal 
 
 
-
 
NC_011206  Lferr_1055  nickel-dependent hydrogenase large subunit  50.48 
 
 
432 aa  403  1e-111  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.620596 
 
 
-
 
NC_011761  AFE_0937  [NiFe] hydrogenase, alpha subunit, putative  50.48 
 
 
422 aa  403  1e-111  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.952693  n/a   
 
 
-
 
NC_007404  Tbd_1263  hypothetical protein  47.97 
 
 
433 aa  379  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.321319  normal 
 
 
-
 
NC_006369  lpl2387  hypothetical protein  42.72 
 
 
430 aa  355  6.999999999999999e-97  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp2532  hypothetical protein  42.65 
 
 
430 aa  352  8.999999999999999e-96  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_1256  nickel-dependent hydrogenase large subunit  35.51 
 
 
430 aa  254  2.0000000000000002e-66  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0884  nickel-dependent hydrogenase, large subunit  35.65 
 
 
432 aa  243  5e-63  Magnetococcus sp. MC-1  Bacteria  normal  0.912975  normal  0.251676 
 
 
-
 
NC_011059  Paes_1929  nickel-dependent hydrogenase large subunit  32.29 
 
 
425 aa  241  2.9999999999999997e-62  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1122  nickel-dependent hydrogenase, large subunit  34.04 
 
 
425 aa  234  2.0000000000000002e-60  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2605  nickel-dependent hydrogenase large subunit  34.19 
 
 
439 aa  234  2.0000000000000002e-60  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0537031  n/a   
 
 
-
 
NC_010831  Cphamn1_2132  nickel-dependent hydrogenase large subunit  31.5 
 
 
425 aa  233  4.0000000000000004e-60  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0448433  normal  0.0283043 
 
 
-
 
NC_007514  Cag_0245  hydrogenase/sulfur reductase, alpha subunit  32.56 
 
 
426 aa  227  3e-58  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.392685  n/a   
 
 
-
 
NC_011060  Ppha_2499  nickel-dependent hydrogenase large subunit  31.08 
 
 
424 aa  226  5.0000000000000005e-58  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2249  nickel-dependent hydrogenase large subunit  36.83 
 
 
423 aa  224  3e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1968  nickel-dependent hydrogenase large subunit  37.12 
 
 
423 aa  217  4e-55  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2169  nickel-dependent hydrogenase, large subunit  30.84 
 
 
424 aa  216  9e-55  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_2097  nickel-dependent hydrogenase large subunit  30.6 
 
 
424 aa  212  1e-53  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0080  nickel-dependent hydrogenase large subunit  29.55 
 
 
421 aa  208  2e-52  Aciduliprofundum boonei T469  Archaea  normal  0.303597  n/a   
 
 
-
 
NC_007517  Gmet_3320  nickel-dependent hydrogenase, large subunit  30.77 
 
 
473 aa  182  1e-44  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3972  nickel-dependent hydrogenase large subunit  30.44 
 
 
473 aa  179  1e-43  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000529156 
 
 
-
 
NC_009635  Maeo_0097  nickel-dependent hydrogenase large subunit  29.52 
 
 
475 aa  178  1e-43  Methanococcus aeolicus Nankai-3  Archaea  normal  0.325648  n/a   
 
 
-
 
NC_011146  Gbem_3884  nickel-dependent hydrogenase large subunit  30.22 
 
 
473 aa  177  3e-43  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2419  nickel-dependent hydrogenase, large subunit  30.77 
 
 
473 aa  173  3.9999999999999995e-42  Geobacter sulfurreducens PCA  Bacteria  normal  0.954862  n/a   
 
 
-
 
NC_009051  Memar_1007  nickel-dependent hydrogenase, large subunit  30.63 
 
 
455 aa  172  6.999999999999999e-42  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010814  Glov_1553  nickel-dependent hydrogenase large subunit  28.66 
 
 
479 aa  171  2e-41  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1673  nickel-dependent hydrogenase, large subunit  30.36 
 
 
493 aa  172  2e-41  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.521628  n/a   
 
 
-
 
NC_013158  Huta_2102  nickel-dependent hydrogenase large subunit  30.8 
 
 
472 aa  167  5e-40  Halorhabdus utahensis DSM 12940  Archaea  normal  0.782605  n/a   
 
 
-
 
NC_010524  Lcho_1459  nickel-dependent hydrogenase large subunit  31.51 
 
 
504 aa  166  5.9999999999999996e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.720227 
 
 
-
 
NC_002977  MCA0114  NAD-reducing hydrogenase, beta subunit  29.57 
 
 
494 aa  166  1.0000000000000001e-39  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0531  putative nickel-dependent hydrogenase, large subunit  31.14 
 
 
504 aa  164  2.0000000000000002e-39  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2716  nickel-dependent hydrogenase, large subunit  27.95 
 
 
479 aa  165  2.0000000000000002e-39  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.892044  normal 
 
 
-
 
NC_011662  Tmz1t_2250  nickel-dependent hydrogenase large subunit  30.04 
 
 
488 aa  162  8.000000000000001e-39  Thauera sp. MZ1T  Bacteria  normal  0.0169608  n/a   
 
 
-
 
NC_008554  Sfum_2221  nickel-dependent hydrogenase, large subunit  30.94 
 
 
482 aa  162  1e-38  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.794889  normal  0.78316 
 
 
-
 
NC_010814  Glov_2791  nickel-dependent hydrogenase large subunit  30.53 
 
 
482 aa  159  8e-38  Geobacter lovleyi SZ  Bacteria  normal  0.119602  n/a   
 
 
-
 
NC_009523  RoseRS_3539  nickel-dependent hydrogenase, large subunit  30.04 
 
 
474 aa  159  1e-37  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2476  nickel-dependent hydrogenase large subunit  30.67 
 
 
473 aa  159  1e-37  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.795621  normal  0.410999 
 
 
-
 
NC_007298  Daro_0982  nickel-dependent hydrogenase, large subunit  29.96 
 
 
487 aa  157  4e-37  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1368  nickel-dependent hydrogenase large subunit  30.65 
 
 
475 aa  157  4e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1215  nickel-dependent hydrogenase, large subunit  30.07 
 
 
499 aa  156  6e-37  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0417903 
 
 
-
 
NC_009634  Mevan_0996  nickel-dependent hydrogenase large subunit  29.88 
 
 
418 aa  155  1e-36  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011661  Dtur_0078  nickel-dependent hydrogenase large subunit  28.98 
 
 
474 aa  154  2.9999999999999998e-36  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0070  nickel-dependent hydrogenase large subunit  28.54 
 
 
471 aa  153  7e-36  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0652  F420-non-reducing hydrogenase subunit A  29.45 
 
 
471 aa  151  2e-35  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007413  Ava_4661  nickel-dependent hydrogenase, large subunit  28.73 
 
 
487 aa  149  7e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1113  nickel-dependent hydrogenase, large subunit  30.87 
 
 
476 aa  149  7e-35  Geobacter metallireducens GS-15  Bacteria  normal  0.301961  normal 
 
 
-
 
NC_007908  Rfer_3855  nickel-dependent hydrogenase, large subunit  29.74 
 
 
507 aa  148  2.0000000000000003e-34  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4160  nickel-dependent hydrogenase large subunit  28.73 
 
 
474 aa  148  2.0000000000000003e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_2013  nickel-dependent hydrogenase large subunit  30.04 
 
 
487 aa  147  4.0000000000000006e-34  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3954  nickel-dependent hydrogenase, large subunit  27.78 
 
 
449 aa  145  1e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.644029 
 
 
-
 
NC_013161  Cyan8802_0092  nickel-dependent hydrogenase large subunit  28.63 
 
 
474 aa  145  2e-33  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.643449 
 
 
-
 
NC_011726  PCC8801_0095  nickel-dependent hydrogenase large subunit  28.63 
 
 
474 aa  145  2e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU2718  NAD-reducing hydrogenase, beta subunit  29.23 
 
 
478 aa  142  8e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0615  hydrogenase, group 3, VhuA subunit, putative  26.96 
 
 
479 aa  142  9e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_553  nickel-dependent hydrogenase, group 3, large subunit  27.17 
 
 
479 aa  142  9.999999999999999e-33  Dehalococcoides sp. VS  Bacteria  normal  0.0139726  n/a   
 
 
-
 
NC_007973  Rmet_1525  nickel-dependent hydrogenase, large subunit  28.06 
 
 
488 aa  141  1.9999999999999998e-32  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00000894187  hitchhiker  0.00486844 
 
 
-
 
NC_010571  Oter_3680  nickel-dependent hydrogenase large subunit  28.48 
 
 
509 aa  142  1.9999999999999998e-32  Opitutus terrae PB90-1  Bacteria  normal  0.0782936  normal  0.503756 
 
 
-
 
NC_009455  DehaBAV1_0588  F420-non-reducing hydrogenase subunit A  27.1 
 
 
479 aa  140  3e-32  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000204108  n/a   
 
 
-
 
NC_009975  MmarC6_0977  nickel-dependent hydrogenase large subunit  28.64 
 
 
418 aa  140  6e-32  Methanococcus maripaludis C6  Archaea  normal  0.390644  n/a   
 
 
-
 
NC_009635  Maeo_1215  nickel-dependent hydrogenase large subunit  27.9 
 
 
418 aa  139  7.999999999999999e-32  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013223  Dret_2258  nickel-dependent hydrogenase large subunit  27.14 
 
 
486 aa  139  1e-31  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2555  NAD-reducing hydrogenase HoxS beta subunit  27.59 
 
 
476 aa  138  2e-31  Synechococcus elongatus PCC 7942  Bacteria  normal  0.148056  normal 
 
 
-
 
NC_009135  MmarC5_1712  F420-non-reducing hydrogenase subunit A  28.4 
 
 
418 aa  138  2e-31  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_010424  Daud_1651  nickel-dependent hydrogenase, large subunit  26.74 
 
 
485 aa  137  3.0000000000000003e-31  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0969  nickel-dependent hydrogenase large subunit  26.94 
 
 
418 aa  137  4e-31  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_011666  Msil_2748  nickel-dependent hydrogenase large subunit  27.98 
 
 
488 aa  135  9.999999999999999e-31  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_3537  nickel-dependent hydrogenase, large subunit  29.41 
 
 
469 aa  134  3e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1791  hydrogen dehydrogenase  26.71 
 
 
449 aa  132  1.0000000000000001e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_4292  nickel-dependent hydrogenase large subunit  29.09 
 
 
494 aa  131  3e-29  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4314  nickel-dependent hydrogenase large subunit  28.66 
 
 
494 aa  130  5.0000000000000004e-29  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4043  nickel-dependent hydrogenase large subunit  27.85 
 
 
473 aa  129  1.0000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0198059 
 
 
-
 
NC_007760  Adeh_4162  nickel-dependent hydrogenase, large subunit  29.41 
 
 
494 aa  121  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0906302  n/a   
 
 
-
 
NC_009634  Mevan_0073  nickel-dependent hydrogenase large subunit  25.23 
 
 
410 aa  121  3e-26  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008726  Mvan_4113  nickel-dependent hydrogenase, large subunit  26.42 
 
 
489 aa  120  6e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0509028  normal  0.183384 
 
 
-
 
NC_009135  MmarC5_0649  coenzyme F420-reducing hydrogenase, alpha subunit  25.45 
 
 
410 aa  119  7.999999999999999e-26  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2287  coenzyme F420 hydrogenase, subunit alpha  25.71 
 
 
456 aa  108  3e-22  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.304616 
 
 
-
 
NC_007796  Mhun_2332  nickel-dependent hydrogenase, large subunit  24.26 
 
 
469 aa  107  5e-22  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013173  Dbac_1969  nickel-dependent hydrogenase large subunit  24.46 
 
 
514 aa  106  7e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.668451  n/a   
 
 
-
 
NC_009635  Maeo_1045  nickel-dependent hydrogenase large subunit  28.3 
 
 
385 aa  103  4e-21  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008942  Mlab_0015  coenzyme F420-reducing hydrogenase, alpha subunit  24.42 
 
 
455 aa  103  6e-21  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_008751  Dvul_1248  nickel-dependent hydrogenase, large subunit  25.47 
 
 
488 aa  103  7e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.210122 
 
 
-
 
NC_010424  Daud_1940  hydrogen:quinone oxidoreductase  27.36 
 
 
475 aa  102  2e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2023  nickel-dependent hydrogenase, large subunit  26.94 
 
 
438 aa  100  4e-20  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.113638 
 
 
-
 
NC_011898  Ccel_1071  nickel-dependent hydrogenase large subunit  24.95 
 
 
470 aa  100  5e-20  Clostridium cellulolyticum H10  Bacteria  normal  0.018808  n/a   
 
 
-
 
NC_007355  Mbar_A0452  coenzyme F420-reducing hydrogenase, alpha subunit  25.16 
 
 
456 aa  99.4  1e-19  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013385  Adeg_1787  nickel-dependent hydrogenase large subunit  25.47 
 
 
481 aa  99.4  1e-19  Ammonifex degensii KC4  Bacteria  normal  0.993845  n/a   
 
 
-
 
NC_011830  Dhaf_3270  nickel-dependent hydrogenase large subunit  24.29 
 
 
517 aa  98.6  2e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0692  nickel-dependent hydrogenase large subunit  27.23 
 
 
390 aa  88.2  3e-16  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>