More than 300 homologs were found in PanDaTox collection
for query gene Aboo_0080 on replicon NC_013926
Organism: Aciduliprofundum boonei T469



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013926  Aboo_0080  nickel-dependent hydrogenase large subunit  100 
 
 
421 aa  858    Aciduliprofundum boonei T469  Archaea  normal  0.303597  n/a   
 
 
-
 
NC_009483  Gura_1122  nickel-dependent hydrogenase, large subunit  36.49 
 
 
425 aa  266  4e-70  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2605  nickel-dependent hydrogenase large subunit  35.01 
 
 
439 aa  262  1e-68  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0537031  n/a   
 
 
-
 
NC_008639  Cpha266_2169  nickel-dependent hydrogenase, large subunit  33.73 
 
 
424 aa  259  9e-68  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1929  nickel-dependent hydrogenase large subunit  33.1 
 
 
425 aa  257  3e-67  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_2132  nickel-dependent hydrogenase large subunit  34.04 
 
 
425 aa  252  8.000000000000001e-66  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0448433  normal  0.0283043 
 
 
-
 
NC_007777  Francci3_4496  nickel-dependent hydrogenase, large subunit  33.33 
 
 
430 aa  250  4e-65  Frankia sp. CcI3  Bacteria  normal  0.401222  normal 
 
 
-
 
NC_010803  Clim_2097  nickel-dependent hydrogenase large subunit  33.01 
 
 
424 aa  245  9e-64  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2499  nickel-dependent hydrogenase large subunit  32.78 
 
 
424 aa  244  1.9999999999999999e-63  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1256  nickel-dependent hydrogenase large subunit  31.71 
 
 
430 aa  239  5e-62  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2660  Coenzyme F420 hydrogenase  29.21 
 
 
433 aa  232  8.000000000000001e-60  Cyanothece sp. PCC 7425  Bacteria  normal  0.041142  normal 
 
 
-
 
NC_013947  Snas_3474  nickel-dependent hydrogenase large subunit  30.81 
 
 
432 aa  231  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.455292  normal 
 
 
-
 
NC_010581  Bind_0507  nickel-dependent hydrogenase large subunit  31.7 
 
 
429 aa  228  1e-58  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0245  hydrogenase/sulfur reductase, alpha subunit  30.79 
 
 
426 aa  228  1e-58  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.392685  n/a   
 
 
-
 
NC_013501  Rmar_2590  nickel-dependent hydrogenase large subunit  30.35 
 
 
433 aa  226  5.0000000000000005e-58  Rhodothermus marinus DSM 4252  Bacteria  normal  0.282401  n/a   
 
 
-
 
NC_011146  Gbem_1968  nickel-dependent hydrogenase large subunit  33.81 
 
 
423 aa  226  6e-58  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2249  nickel-dependent hydrogenase large subunit  33.33 
 
 
423 aa  225  1e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_0884  nickel-dependent hydrogenase, large subunit  33.33 
 
 
432 aa  225  1e-57  Magnetococcus sp. MC-1  Bacteria  normal  0.912975  normal  0.251676 
 
 
-
 
NC_006369  lpl2387  hypothetical protein  31.52 
 
 
430 aa  222  9.999999999999999e-57  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011761  AFE_0937  [NiFe] hydrogenase, alpha subunit, putative  31.08 
 
 
422 aa  222  9.999999999999999e-57  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.952693  n/a   
 
 
-
 
NC_011206  Lferr_1055  nickel-dependent hydrogenase large subunit  31.08 
 
 
432 aa  221  9.999999999999999e-57  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.620596 
 
 
-
 
NC_006368  lpp2532  hypothetical protein  31.03 
 
 
430 aa  220  3e-56  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009077  Mjls_3427  nickel-dependent hydrogenase, large subunit  30.73 
 
 
430 aa  219  6e-56  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260108 
 
 
-
 
NC_008146  Mmcs_3416  nickel-dependent hydrogenase, large subunit  30.73 
 
 
430 aa  219  6e-56  Mycobacterium sp. MCS  Bacteria  normal  0.291194  n/a   
 
 
-
 
NC_008705  Mkms_3479  nickel-dependent hydrogenase, large subunit  30.73 
 
 
430 aa  219  6e-56  Mycobacterium sp. KMS  Bacteria  normal  0.441341  normal  0.0523033 
 
 
-
 
NC_011901  Tgr7_1138  nickel-dependent hydrogenase large subunit  30.21 
 
 
431 aa  215  9.999999999999999e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_04400  Soluble nickel-dependent hydrogenase, large subunit, HoxH  31.52 
 
 
419 aa  212  1e-53  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1858  nickel-dependent hydrogenase large subunit  31.16 
 
 
428 aa  210  3e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.940457  normal 
 
 
-
 
NC_008578  Acel_1019  nickel-dependent hydrogenase, large subunit  29.55 
 
 
431 aa  208  2e-52  Acidothermus cellulolyticus 11B  Bacteria  normal  hitchhiker  0.00653003 
 
 
-
 
NC_007404  Tbd_1263  hypothetical protein  30.19 
 
 
433 aa  207  4e-52  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.321319  normal 
 
 
-
 
NC_013595  Sros_4826  nickel-dependent hydrogenase large subunit  31.46 
 
 
428 aa  204  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.106762  normal 
 
 
-
 
NC_008554  Sfum_2221  nickel-dependent hydrogenase, large subunit  29.93 
 
 
482 aa  187  2e-46  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.794889  normal  0.78316 
 
 
-
 
NC_009634  Mevan_0070  nickel-dependent hydrogenase large subunit  29.16 
 
 
471 aa  182  8.000000000000001e-45  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0097  nickel-dependent hydrogenase large subunit  31.98 
 
 
475 aa  181  2e-44  Methanococcus aeolicus Nankai-3  Archaea  normal  0.325648  n/a   
 
 
-
 
NC_009051  Memar_1007  nickel-dependent hydrogenase, large subunit  30.85 
 
 
455 aa  177  3e-43  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0652  F420-non-reducing hydrogenase subunit A  30.15 
 
 
471 aa  176  8e-43  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_011661  Dtur_0078  nickel-dependent hydrogenase large subunit  30.15 
 
 
474 aa  174  1.9999999999999998e-42  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2476  nickel-dependent hydrogenase large subunit  31.14 
 
 
473 aa  173  5.999999999999999e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.795621  normal  0.410999 
 
 
-
 
NC_008554  Sfum_3954  nickel-dependent hydrogenase, large subunit  29.56 
 
 
449 aa  172  9e-42  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.644029 
 
 
-
 
NC_007517  Gmet_3320  nickel-dependent hydrogenase, large subunit  28.54 
 
 
473 aa  171  3e-41  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3972  nickel-dependent hydrogenase large subunit  28.82 
 
 
473 aa  168  1e-40  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000529156 
 
 
-
 
NC_013158  Huta_2102  nickel-dependent hydrogenase large subunit  30.11 
 
 
472 aa  167  2.9999999999999998e-40  Halorhabdus utahensis DSM 12940  Archaea  normal  0.782605  n/a   
 
 
-
 
NC_011145  AnaeK_4292  nickel-dependent hydrogenase large subunit  28.18 
 
 
494 aa  166  5e-40  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4314  nickel-dependent hydrogenase large subunit  28.39 
 
 
494 aa  166  5e-40  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2258  nickel-dependent hydrogenase large subunit  27.41 
 
 
486 aa  166  9e-40  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0615  hydrogenase, group 3, VhuA subunit, putative  27.35 
 
 
479 aa  164  2.0000000000000002e-39  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4162  nickel-dependent hydrogenase, large subunit  27.56 
 
 
494 aa  165  2.0000000000000002e-39  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0906302  n/a   
 
 
-
 
NC_013385  Adeg_2013  nickel-dependent hydrogenase large subunit  27.71 
 
 
487 aa  164  3e-39  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3884  nickel-dependent hydrogenase large subunit  28.16 
 
 
473 aa  163  6e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3539  nickel-dependent hydrogenase, large subunit  30.44 
 
 
474 aa  163  6e-39  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2419  nickel-dependent hydrogenase, large subunit  29.22 
 
 
473 aa  163  7e-39  Geobacter sulfurreducens PCA  Bacteria  normal  0.954862  n/a   
 
 
-
 
NC_009634  Mevan_0996  nickel-dependent hydrogenase large subunit  30.94 
 
 
418 aa  163  7e-39  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010814  Glov_2791  nickel-dependent hydrogenase large subunit  29.77 
 
 
482 aa  162  8.000000000000001e-39  Geobacter lovleyi SZ  Bacteria  normal  0.119602  n/a   
 
 
-
 
NC_009975  MmarC6_0977  nickel-dependent hydrogenase large subunit  30.64 
 
 
418 aa  162  1e-38  Methanococcus maripaludis C6  Archaea  normal  0.390644  n/a   
 
 
-
 
NC_008726  Mvan_4113  nickel-dependent hydrogenase, large subunit  28.54 
 
 
489 aa  161  2e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0509028  normal  0.183384 
 
 
-
 
NC_010814  Glov_1553  nickel-dependent hydrogenase large subunit  29.78 
 
 
479 aa  160  3e-38  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0588  F420-non-reducing hydrogenase subunit A  27.25 
 
 
479 aa  160  5e-38  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000204108  n/a   
 
 
-
 
NC_009637  MmarC7_0969  nickel-dependent hydrogenase large subunit  30.22 
 
 
418 aa  160  5e-38  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_007973  Rmet_1525  nickel-dependent hydrogenase, large subunit  28.3 
 
 
488 aa  159  6e-38  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00000894187  hitchhiker  0.00486844 
 
 
-
 
NC_013552  DhcVS_553  nickel-dependent hydrogenase, group 3, large subunit  27.25 
 
 
479 aa  159  7e-38  Dehalococcoides sp. VS  Bacteria  normal  0.0139726  n/a   
 
 
-
 
NC_009135  MmarC5_1712  F420-non-reducing hydrogenase subunit A  30.38 
 
 
418 aa  159  8e-38  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1673  nickel-dependent hydrogenase, large subunit  27.84 
 
 
493 aa  158  1e-37  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.521628  n/a   
 
 
-
 
NC_010424  Daud_1651  nickel-dependent hydrogenase, large subunit  27.47 
 
 
485 aa  157  3e-37  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4661  nickel-dependent hydrogenase, large subunit  28.94 
 
 
487 aa  157  3e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0114  NAD-reducing hydrogenase, beta subunit  27.13 
 
 
494 aa  156  5.0000000000000005e-37  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_1215  nickel-dependent hydrogenase large subunit  30.5 
 
 
418 aa  157  5.0000000000000005e-37  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010524  Lcho_1459  nickel-dependent hydrogenase large subunit  28.42 
 
 
504 aa  156  6e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.720227 
 
 
-
 
NC_008554  Sfum_2716  nickel-dependent hydrogenase, large subunit  29.27 
 
 
479 aa  156  7e-37  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.892044  normal 
 
 
-
 
NC_008709  Ping_1215  nickel-dependent hydrogenase, large subunit  28.24 
 
 
499 aa  155  1e-36  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0417903 
 
 
-
 
NC_008554  Sfum_3537  nickel-dependent hydrogenase, large subunit  27.49 
 
 
469 aa  155  2e-36  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1368  nickel-dependent hydrogenase large subunit  28.81 
 
 
475 aa  152  1e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1791  hydrogen dehydrogenase  28.38 
 
 
449 aa  152  1e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2718  NAD-reducing hydrogenase, beta subunit  27.43 
 
 
478 aa  147  3e-34  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2748  nickel-dependent hydrogenase large subunit  30 
 
 
488 aa  145  1e-33  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_3680  nickel-dependent hydrogenase large subunit  27.1 
 
 
509 aa  145  2e-33  Opitutus terrae PB90-1  Bacteria  normal  0.0782936  normal  0.503756 
 
 
-
 
NC_007953  Bxe_C0531  putative nickel-dependent hydrogenase, large subunit  26.64 
 
 
504 aa  144  3e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3855  nickel-dependent hydrogenase, large subunit  27.21 
 
 
507 aa  144  4e-33  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4160  nickel-dependent hydrogenase large subunit  28.63 
 
 
474 aa  143  6e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_0092  nickel-dependent hydrogenase large subunit  28.42 
 
 
474 aa  143  6e-33  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.643449 
 
 
-
 
NC_011726  PCC8801_0095  nickel-dependent hydrogenase large subunit  28.42 
 
 
474 aa  142  8e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_4043  nickel-dependent hydrogenase large subunit  26.44 
 
 
473 aa  140  6e-32  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0198059 
 
 
-
 
NC_007517  Gmet_1113  nickel-dependent hydrogenase, large subunit  28.51 
 
 
476 aa  139  7.999999999999999e-32  Geobacter metallireducens GS-15  Bacteria  normal  0.301961  normal 
 
 
-
 
NC_007298  Daro_0982  nickel-dependent hydrogenase, large subunit  27.43 
 
 
487 aa  138  2e-31  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2250  nickel-dependent hydrogenase large subunit  27.11 
 
 
488 aa  137  3.0000000000000003e-31  Thauera sp. MZ1T  Bacteria  normal  0.0169608  n/a   
 
 
-
 
NC_007604  Synpcc7942_2555  NAD-reducing hydrogenase HoxS beta subunit  26.17 
 
 
476 aa  135  9.999999999999999e-31  Synechococcus elongatus PCC 7942  Bacteria  normal  0.148056  normal 
 
 
-
 
NC_009675  Anae109_4306  nickel-dependent hydrogenase large subunit  26.61 
 
 
498 aa  134  3e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.891144  normal  0.552071 
 
 
-
 
NC_007355  Mbar_A2287  coenzyme F420 hydrogenase, subunit alpha  26.64 
 
 
456 aa  132  1.0000000000000001e-29  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.304616 
 
 
-
 
NC_008942  Mlab_0015  coenzyme F420-reducing hydrogenase, alpha subunit  25.33 
 
 
455 aa  130  7.000000000000001e-29  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_009135  MmarC5_0649  coenzyme F420-reducing hydrogenase, alpha subunit  28.54 
 
 
410 aa  126  6e-28  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0452  coenzyme F420-reducing hydrogenase, alpha subunit  25.77 
 
 
456 aa  125  1e-27  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_1045  nickel-dependent hydrogenase large subunit  28.21 
 
 
385 aa  124  4e-27  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_2174  nickel-dependent hydrogenase, large subunit  26.02 
 
 
455 aa  122  9.999999999999999e-27  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0073  nickel-dependent hydrogenase large subunit  27.51 
 
 
410 aa  120  4.9999999999999996e-26  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_013385  Adeg_1787  nickel-dependent hydrogenase large subunit  24.44 
 
 
481 aa  119  7.999999999999999e-26  Ammonifex degensii KC4  Bacteria  normal  0.993845  n/a   
 
 
-
 
NC_011898  Ccel_1071  nickel-dependent hydrogenase large subunit  26.32 
 
 
470 aa  118  1.9999999999999998e-25  Clostridium cellulolyticum H10  Bacteria  normal  0.018808  n/a   
 
 
-
 
NC_007796  Mhun_2332  nickel-dependent hydrogenase, large subunit  22.88 
 
 
469 aa  117  3e-25  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010424  Daud_1042  nickel-dependent hydrogenase, large subunit  23.98 
 
 
485 aa  114  2.0000000000000002e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.90765  n/a   
 
 
-
 
NC_013173  Dbac_1969  nickel-dependent hydrogenase large subunit  25.15 
 
 
514 aa  115  2.0000000000000002e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.668451  n/a   
 
 
-
 
NC_009975  MmarC6_1291  coenzyme F420 hydrogenase, subunit alpha  26.95 
 
 
390 aa  111  2.0000000000000002e-23  Methanococcus maripaludis C6  Archaea  normal  0.333817  n/a   
 
 
-
 
NC_008751  Dvul_1248  nickel-dependent hydrogenase, large subunit  24.37 
 
 
488 aa  110  3e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.210122 
 
 
-
 
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