More than 300 homologs were found in PanDaTox collection
for query gene Aave_0017 on replicon NC_008752
Organism: Acidovorax citrulli AAC00-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008752  Aave_0017  GntR family transcriptional regulator  100 
 
 
442 aa  848    Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4162  GntR family transcriptional regulator  57.33 
 
 
442 aa  393  1e-108  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0018  transcriptional regulator, GntR family with aminotransferase domain  58.01 
 
 
442 aa  394  1e-108  Acidovorax ebreus TPSY  Bacteria  normal  0.316764  n/a   
 
 
-
 
NC_009832  Spro_2563  transcriptional regulator  46.82 
 
 
434 aa  334  2e-90  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4186  transcriptional regulator, GntR family with aminotransferase domain-containing protein  42.76 
 
 
436 aa  260  4e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.710263  normal  0.0862967 
 
 
-
 
NC_009425  Ent638_4213  GntR family transcriptional regulator  33.33 
 
 
432 aa  228  2e-58  Enterobacter sp. 638  Bacteria  normal  0.0990086  normal 
 
 
-
 
NC_011094  SeSA_A2672  GntR-family transcriptional regulator  38.16 
 
 
430 aa  228  2e-58  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.562569  normal 
 
 
-
 
NC_011083  SeHA_C2696  GntR family transcriptional regulator  38.16 
 
 
430 aa  226  4e-58  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2802  GntR family transcriptional regulator  38.16 
 
 
430 aa  226  6e-58  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2581  GntR-family transcriptional regulator  37.93 
 
 
430 aa  225  1e-57  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2630  GntR family transcriptional regulator  38.16 
 
 
430 aa  224  2e-57  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0520726  normal 
 
 
-
 
NC_013131  Caci_1566  transcriptional regulator, GntR family with aminotransferase domain  40.5 
 
 
444 aa  217  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.487946 
 
 
-
 
NC_007974  Rmet_4117  transcriptional regulator with aminotransferase and DNA binding domains (possibly involved in vitB6 biosynthesis)  36.07 
 
 
431 aa  209  8e-53  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2382  transcriptional regulator, GntR family with aminotransferase domain  38.58 
 
 
428 aa  209  9e-53  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.268016  normal 
 
 
-
 
NC_013172  Bfae_00360  transcriptional regulator with HTH domain and aminotransferase domain  37.62 
 
 
455 aa  191  2e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_24220  transcriptional regulator with HTH domain and aminotransferase domain  35.86 
 
 
448 aa  170  4e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1430  transcriptional regulator, GntR family with aminotransferase domain  35.21 
 
 
446 aa  168  2e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0746057  normal 
 
 
-
 
NC_014158  Tpau_0837  transcriptional regulator, GntR family with aminotransferase domain  34.23 
 
 
462 aa  168  2e-40  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.439147  n/a   
 
 
-
 
NC_012880  Dd703_0385  transcriptional regulator, GntR family with aminotransferase domain  30.96 
 
 
452 aa  149  7e-35  Dickeya dadantii Ech703  Bacteria  normal  0.577938  n/a   
 
 
-
 
NC_012848  Rleg_5410  transcriptional regulator, GntR family with aminotransferase domain  30.71 
 
 
441 aa  144  3e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1418  putative transcriptional regulator  31.58 
 
 
532 aa  144  4e-33  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5225  transcriptional regulator, GntR family with aminotransferase domain  30.77 
 
 
441 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.260155 
 
 
-
 
NC_013124  Afer_0940  transcriptional regulator, GntR family with aminotransferase domain  35.71 
 
 
462 aa  141  1.9999999999999998e-32  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0465159  n/a   
 
 
-
 
NC_007952  Bxe_B2819  GntR family transcriptional regulator  32.95 
 
 
467 aa  135  1.9999999999999998e-30  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1472  GntR family transcriptional regulator  28.95 
 
 
449 aa  131  2.0000000000000002e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.240551 
 
 
-
 
NC_008254  Meso_0044  GntR family transcriptional regulator  28.67 
 
 
445 aa  114  4.0000000000000004e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3275  transcriptional regulator  30.82 
 
 
468 aa  93.6  6e-18  Pseudomonas putida GB-1  Bacteria  normal  normal  0.589636 
 
 
-
 
NC_013132  Cpin_6053  transcriptional regulator, GntR family with aminotransferase domain  25.67 
 
 
472 aa  92.8  1e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.137627  normal 
 
 
-
 
NC_011071  Smal_3796  transcriptional regulator, GntR family with aminotransferase domain  29.72 
 
 
471 aa  91.3  3e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.975014  normal 
 
 
-
 
NC_010086  Bmul_3543  transcriptional regulator  33.03 
 
 
479 aa  90.9  4e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735344  normal 
 
 
-
 
NC_007952  Bxe_B0246  GntR family transcriptional regulator  29.66 
 
 
507 aa  90.5  5e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3364  transcriptional regulator  27.58 
 
 
498 aa  90.5  6e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0881  GntR family transcriptional regulator  29.57 
 
 
478 aa  89.7  1e-16  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.426216  normal 
 
 
-
 
NC_011981  Avi_7573  transcriptional regulator GntR family  28.41 
 
 
467 aa  89  2e-16  Agrobacterium vitis S4  Bacteria  normal  0.688585  n/a   
 
 
-
 
NC_003909  BCE_3093  GntR family transcriptional regulator  24.02 
 
 
480 aa  88.6  2e-16  Bacillus cereus ATCC 10987  Bacteria  normal  0.0883302  n/a   
 
 
-
 
NC_006274  BCZK2781  GntR family transcriptional regulator  24.51 
 
 
480 aa  88.6  2e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0043  GntR family transcriptional regulator  30.96 
 
 
492 aa  89  2e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3074  transcriptional regulator, GntR family/aminotransferase, class I protein  24.02 
 
 
480 aa  88.2  2e-16  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A3058  transcriptional regulator, GntR family  24.02 
 
 
480 aa  88.2  2e-16  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2188  transcriptional regulator, GntR family/aminotransferase, class I protein  24.28 
 
 
483 aa  87.8  3e-16  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0027297 
 
 
-
 
NC_011891  A2cp1_1714  transcriptional regulator, GntR family with aminotransferase domain  30.46 
 
 
488 aa  87.4  5e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0550689  n/a   
 
 
-
 
NC_005945  BAS2847  GntR family transcriptional regulator  23.8 
 
 
480 aa  87  6e-16  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3091  transcriptional regulator, GntR family/aminotransferase, class I protein  24.06 
 
 
480 aa  87  6e-16  Bacillus cereus AH187  Bacteria  hitchhiker  0.0045104  n/a   
 
 
-
 
NC_007530  GBAA_3062  GntR family transcriptional regulator  23.8 
 
 
480 aa  87  6e-16  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3297  hypothetical protein  27.99 
 
 
493 aa  87  7e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0920316 
 
 
-
 
NC_007511  Bcep18194_B2171  GntR family transcriptional regulator  26.9 
 
 
507 aa  86.7  8e-16  Burkholderia sp. 383  Bacteria  normal  0.164401  normal 
 
 
-
 
NC_010086  Bmul_4666  transcriptional regulator  27.27 
 
 
511 aa  86.3  9e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2841  transcriptional regulator  23.8 
 
 
480 aa  85.9  0.000000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.171165  n/a   
 
 
-
 
NC_012793  GWCH70_1952  transcriptional regulator, GntR family with aminotransferase domain  21.13 
 
 
465 aa  85.9  0.000000000000001  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00720437  n/a   
 
 
-
 
NC_009052  Sbal_4072  GntR family transcriptional regulator  25.06 
 
 
458 aa  85.9  0.000000000000001  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4318  GntR family transcriptional regulator  26.89 
 
 
504 aa  85.9  0.000000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.632192  normal 
 
 
-
 
NC_009620  Smed_3701  GntR family transcriptional regulator  29.7 
 
 
478 aa  85.9  0.000000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_2044  GntR family transcriptional regulator  23.16 
 
 
480 aa  85.9  0.000000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.439116  n/a   
 
 
-
 
NC_005957  BT9727_2820  GntR family transcriptional regulator  23.8 
 
 
480 aa  85.1  0.000000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1082  transcriptional regulator, GntR family with aminotransferase domain-containing protein  28.54 
 
 
457 aa  84.7  0.000000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.029023  normal 
 
 
-
 
NC_011758  Mchl_5391  transcriptional regulator, GntR family with aminotransferase domain  30.02 
 
 
481 aa  84.7  0.000000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1990  transcriptional regulator, GntR family with aminotransferase domain  33.11 
 
 
461 aa  84.3  0.000000000000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011149  SeAg_B2919  transcriptional regulator, GntR family with aminotransferase domain  29.3 
 
 
444 aa  84.3  0.000000000000004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6889  transcriptional regulator, GntR family with aminotransferase domain  26.02 
 
 
515 aa  84.3  0.000000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0343806  normal  0.248624 
 
 
-
 
NC_010676  Bphyt_7128  transcriptional regulator, GntR family with aminotransferase domain  28.14 
 
 
507 aa  84.3  0.000000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1641  transcriptional regulator, GntR family with aminotransferase domain  31 
 
 
488 aa  84.3  0.000000000000004  Anaeromyxobacter sp. K  Bacteria  normal  0.119637  n/a   
 
 
-
 
NC_011094  SeSA_A2950  transcriptional regulator, GntR family with aminotransferase domain  29.3 
 
 
444 aa  84.3  0.000000000000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.130328  normal  0.0175968 
 
 
-
 
NC_011080  SNSL254_A3002  GntR family transcriptional regulator  29.3 
 
 
444 aa  84  0.000000000000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.00227723 
 
 
-
 
NC_011205  SeD_A3108  GntR family transcriptional regulator  29.3 
 
 
444 aa  84  0.000000000000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.552212  normal  0.675979 
 
 
-
 
NC_011083  SeHA_C2985  GntR family transcriptional regulator  29.3 
 
 
444 aa  84  0.000000000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.12333 
 
 
-
 
NC_008391  Bamb_3295  GntR family transcriptional regulator  26.21 
 
 
507 aa  84  0.000000000000006  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.761418 
 
 
-
 
NC_011145  AnaeK_0047  transcriptional regulator, GntR family with aminotransferase domain  31.34 
 
 
482 aa  83.2  0.000000000000008  Anaeromyxobacter sp. K  Bacteria  normal  0.493151  n/a   
 
 
-
 
NC_010086  Bmul_3960  transcriptional regulator  31.11 
 
 
586 aa  83.2  0.000000000000008  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0473267 
 
 
-
 
NC_010552  BamMC406_3811  transcriptional regulator  26.21 
 
 
507 aa  83.2  0.000000000000009  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_2233  GntR family transcriptional regulator  31.63 
 
 
488 aa  82.8  0.00000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.420665  n/a   
 
 
-
 
NC_007492  Pfl01_3202  GntR family transcriptional regulator  26.53 
 
 
478 aa  82  0.00000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00416739 
 
 
-
 
NC_007951  Bxe_A4302  GntR family transcriptional regulator  26.23 
 
 
521 aa  81.6  0.00000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4520  transcriptional regulator, GntR family with aminotransferase domain  27.51 
 
 
501 aa  82  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0766  GntR family transcriptional regulator  28.03 
 
 
473 aa  82.4  0.00000000000002  Magnetococcus sp. MC-1  Bacteria  normal  0.124102  normal 
 
 
-
 
NC_007951  Bxe_A1406  GntR family transcriptional regulator  30.23 
 
 
463 aa  81.6  0.00000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.84949 
 
 
-
 
NC_012850  Rleg_1054  transcriptional regulator, GntR family with aminotransferase domain  27.49 
 
 
467 aa  80.9  0.00000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.180567  normal 
 
 
-
 
NC_007492  Pfl01_2317  GntR family transcriptional regulator  27.27 
 
 
462 aa  80.9  0.00000000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1451  transcriptional regulator, GntR family with aminotransferase domain  24.44 
 
 
490 aa  80.9  0.00000000000004  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4320  transcriptional regulator  24.24 
 
 
521 aa  81.3  0.00000000000004  Burkholderia phymatum STM815  Bacteria  normal  normal  0.268323 
 
 
-
 
NC_009952  Dshi_0609  transcriptional regulator, GntR family with aminotransferase domain  26.33 
 
 
514 aa  80.9  0.00000000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2934  GntR family transcriptional regulator  25.56 
 
 
513 aa  80.5  0.00000000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3280  GntR family transcriptional regulator  29.75 
 
 
478 aa  80.5  0.00000000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5088  GntR family transcriptional regulator  29.75 
 
 
478 aa  80.5  0.00000000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.122241  normal 
 
 
-
 
NC_010086  Bmul_3723  transcriptional regulator  30.34 
 
 
520 aa  80.5  0.00000000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.577094  normal  0.097742 
 
 
-
 
NC_002947  PP_2542  GntR family transcriptional regulator  24.94 
 
 
474 aa  80.5  0.00000000000006  Pseudomonas putida KT2440  Bacteria  normal  0.0371084  normal  0.0434236 
 
 
-
 
NC_010515  Bcenmc03_5194  transcriptional regulator  29.75 
 
 
478 aa  80.5  0.00000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2764  GntR family transcriptional regulator  29.63 
 
 
453 aa  80.5  0.00000000000006  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2037  transcriptional regulator  24.94 
 
 
474 aa  80.5  0.00000000000006  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3172  GntR family transcriptional regulator  24.94 
 
 
474 aa  80.1  0.00000000000007  Pseudomonas putida F1  Bacteria  normal  0.30806  normal 
 
 
-
 
NC_013421  Pecwa_2546  transcriptional regulator, GntR family with aminotransferase domain protein  25.99 
 
 
497 aa  80.1  0.00000000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  0.474867  n/a   
 
 
-
 
NC_011891  A2cp1_0059  transcriptional regulator, GntR family with aminotransferase domain  30.29 
 
 
487 aa  80.1  0.00000000000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.869186  n/a   
 
 
-
 
NC_009436  Ent638_0494  GntR family transcriptional regulator  25.29 
 
 
471 aa  79.7  0.00000000000009  Enterobacter sp. 638  Bacteria  normal  normal  0.416299 
 
 
-
 
NC_013946  Mrub_0775  GntR family transcriptional regulator with aminotransferase domain  27.72 
 
 
484 aa  79.7  0.00000000000009  Meiothermus ruber DSM 1279  Bacteria  normal  0.835406  normal  0.904358 
 
 
-
 
NC_007511  Bcep18194_B0568  GntR family transcriptional regulator  29.6 
 
 
473 aa  79.3  0.0000000000001  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4517  transcriptional regulator, GntR family with aminotransferase domain  29.54 
 
 
471 aa  79.7  0.0000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0054  transcriptional regulator, GntR family with aminotransferase domain  28.7 
 
 
479 aa  79.7  0.0000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.38477  normal  0.137274 
 
 
-
 
NC_008044  TM1040_2167  GntR family transcriptional regulator  28.24 
 
 
465 aa  79.3  0.0000000000001  Ruegeria sp. TM1040  Bacteria  normal  normal  0.786725 
 
 
-
 
NC_011368  Rleg2_5513  transcriptional regulator, GntR family with aminotransferase domain  28.37 
 
 
461 aa  79  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.412768  decreased coverage  0.00050533 
 
 
-
 
NC_012917  PC1_0209  transcriptional regulator, GntR family with aminotransferase domain  27.95 
 
 
474 aa  79.3  0.0000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2663  transcriptional regulator, GntR family with aminotransferase domain  27.9 
 
 
469 aa  78.6  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.139501  normal 
 
 
-
 
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