More than 300 homologs were found in PanDaTox collection
for query gene AFE_3295 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011761  AFE_3295  glucose-1-phosphate thymidylyltransferase  100 
 
 
294 aa  598  1e-170  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.00238421  n/a   
 
 
-
 
NC_011206  Lferr_2893  glucose-1-phosphate thymidylyltransferase  100 
 
 
294 aa  598  1e-170  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.413887 
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  69.44 
 
 
296 aa  415  1e-115  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  67.59 
 
 
293 aa  412  1e-114  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
293 aa  411  1e-114  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  68.62 
 
 
293 aa  414  1e-114  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  68.4 
 
 
294 aa  413  1e-114  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  67.71 
 
 
305 aa  409  1e-113  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  68.75 
 
 
296 aa  410  1e-113  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3013  glucose-1-phosphate thymidylyltransferase  64.71 
 
 
296 aa  404  1e-112  Shewanella sediminis HAW-EB3  Bacteria  normal  0.515318  hitchhiker  0.00164401 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  65.17 
 
 
297 aa  407  1e-112  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  64.81 
 
 
292 aa  405  1e-112  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  63.76 
 
 
292 aa  401  1e-111  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_010531  Pnec_0279  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
309 aa  401  1e-111  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.643202  normal 
 
 
-
 
NC_009379  Pnuc_0255  glucose-1-phosphate thymidylyltransferase  64.48 
 
 
309 aa  403  1e-111  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.201113  n/a   
 
 
-
 
NC_007484  Noc_0774  glucose-1-phosphate thymidylyltransferase, long form  67.01 
 
 
292 aa  404  1e-111  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
293 aa  400  1e-111  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  65.74 
 
 
296 aa  402  1e-111  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
293 aa  401  1e-111  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  65.28 
 
 
296 aa  400  1e-110  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
292 aa  399  1e-110  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  63.76 
 
 
292 aa  399  1e-110  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  63.99 
 
 
292 aa  398  1e-110  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0696  glucose-1-phosphate thymidylyltransferase  67.36 
 
 
294 aa  400  1e-110  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.53714  normal 
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
291 aa  400  1e-110  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  66.21 
 
 
293 aa  400  1e-110  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_007794  Saro_3238  glucose-1-phosphate thymidylyltransferase  65.28 
 
 
301 aa  399  1e-110  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  64.73 
 
 
295 aa  397  1e-110  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
291 aa  398  1e-110  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  65.97 
 
 
292 aa  400  1e-110  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  63.07 
 
 
294 aa  394  1e-109  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  7.04371e-05 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  64.83 
 
 
293 aa  395  1e-109  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  63.36 
 
 
299 aa  394  1e-109  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  63.23 
 
 
292 aa  395  1e-109  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  65.52 
 
 
293 aa  394  1e-109  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_008390  Bamb_0752  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
297 aa  396  1e-109  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
294 aa  395  1e-109  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  63.07 
 
 
294 aa  395  1e-109  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
297 aa  396  1e-109  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
294 aa  396  1e-109  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_010682  Rpic_0639  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
294 aa  395  1e-109  Ralstonia pickettii 12J  Bacteria  normal  normal  0.477683 
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  65.52 
 
 
293 aa  394  1e-108  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1574  glucose-1-phosphate thymidylyltransferase  65.49 
 
 
292 aa  393  1e-108  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.446194 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  62.76 
 
 
297 aa  392  1e-108  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2101  glucose-1-phosphate thymidylyltransferase  66.43 
 
 
294 aa  392  1e-108  Synechococcus elongatus PCC 7942  Bacteria  normal  0.338319  normal 
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  64.01 
 
 
297 aa  394  1e-108  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  62.76 
 
 
297 aa  392  1e-108  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  63.45 
 
 
312 aa  391  1e-108  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
294 aa  393  1e-108  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  1.87637e-07 
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  62.76 
 
 
297 aa  391  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  62.89 
 
 
295 aa  392  1e-108  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1565  glucose-1-phosphate thymidylyltransferase  65.49 
 
 
292 aa  392  1e-108  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.995779 
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
297 aa  390  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007641  Rru_B0048  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
294 aa  390  1e-107  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.231271  n/a   
 
 
-
 
NC_010625  Bphy_6726  glucose-1-phosphate thymidylyltransferase  64.46 
 
 
317 aa  388  1e-107  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3489  glucose-1-phosphate thymidylyltransferase  64.85 
 
 
295 aa  389  1e-107  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.374251 
 
 
-
 
NC_007513  Syncc9902_0637  glucose-1-phosphate thymidylyltransferase, long form  64.14 
 
 
310 aa  388  1e-107  Synechococcus sp. CC9902  Bacteria  normal  0.210198  n/a   
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  63.83 
 
 
291 aa  389  1e-107  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_4290  glucose-1-phosphate thymidylyltransferase  65.51 
 
 
294 aa  389  1e-107  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
297 aa  389  1e-107  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
297 aa  390  1e-107  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  64.83 
 
 
312 aa  389  1e-107  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2342  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
292 aa  386  1e-106  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  62.76 
 
 
293 aa  385  1e-106  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_011138  MADE_00988  glucose-1-phosphate thymidylyltransferase  61.17 
 
 
293 aa  385  1e-106  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01934  hypothetical protein  65.92 
 
 
270 aa  384  1e-106  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0924  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
297 aa  387  1e-106  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1494  glucose-1-phosphate thymidylyltransferase  63.25 
 
 
287 aa  385  1e-106  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2754  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
297 aa  387  1e-106  Burkholderia mallei NCTC 10229  Bacteria  normal  0.119435  n/a   
 
 
-
 
NC_009074  BURPS668_3103  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
297 aa  387  1e-106  Burkholderia pseudomallei 668  Bacteria  normal  0.0791129  n/a   
 
 
-
 
NC_009076  BURPS1106A_3140  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
297 aa  387  1e-106  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1851  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
297 aa  387  1e-106  Burkholderia mallei NCTC 10247  Bacteria  normal  0.530858  n/a   
 
 
-
 
NC_008825  Mpe_A0626  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
294 aa  385  1e-106  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.353924 
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  62.2 
 
 
292 aa  387  1e-106  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_3162  glucose-1-phosphate thymidylyltransferase  63.1 
 
 
312 aa  387  1e-106  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  63.07 
 
 
297 aa  385  1e-106  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  63.76 
 
 
305 aa  382  1e-105  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6254  glucose-1-phosphate thymidylyltransferase  62.54 
 
 
295 aa  381  1e-105  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  65.61 
 
 
293 aa  382  1e-105  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1989  glucose-1-phosphate thymidylyltransferase  62.76 
 
 
297 aa  382  1e-105  Burkholderia mallei ATCC 23344  Bacteria  normal  0.112346  n/a   
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  64.24 
 
 
298 aa  381  1e-105  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_011989  Avi_1983  glucose-1-phosphate thymidylyltransferase  62.9 
 
 
287 aa  383  1e-105  Agrobacterium vitis S4  Bacteria  normal  0.967411  n/a   
 
 
-
 
NC_011071  Smal_0504  glucose-1-phosphate thymidylyltransferase  63.48 
 
 
295 aa  381  1e-105  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0219924  normal  0.028839 
 
 
-
 
NC_011145  AnaeK_4427  glucose-1-phosphate thymidylyltransferase  65.73 
 
 
294 aa  378  1e-104  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  62.37 
 
 
294 aa  379  1e-104  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
298 aa  379  1e-104  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4445  glucose-1-phosphate thymidylyltransferase  66.08 
 
 
294 aa  380  1e-104  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  61.51 
 
 
292 aa  379  1e-104  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_008042  TM1040_3859  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
290 aa  379  1e-104  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1783  glucose-1-phosphate thymidylyltransferase  65.86 
 
 
293 aa  380  1e-104  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00712451 
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
296 aa  379  1e-104  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
296 aa  377  1e-103  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_011369  Rleg2_0403  glucose-1-phosphate thymidylyltransferase  63.54 
 
 
303 aa  375  1e-103  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.504553 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  61.67 
 
 
292 aa  376  1e-103  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  59.73 
 
 
296 aa  377  1e-103  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_013522  Taci_1619  glucose-1-phosphate thymidylyltransferase  62.2 
 
 
295 aa  375  1e-103  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0266  glucose-1-phosphate thymidylyltransferase  64.14 
 
 
295 aa  374  1e-103  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.643913  n/a   
 
 
-
 
NC_010571  Oter_3996  glucose-1-phosphate thymidylyltransferase  66.09 
 
 
308 aa  377  1e-103  Opitutus terrae PB90-1  Bacteria  normal  0.206121  normal 
 
 
-
 
NC_008576  Mmc1_1406  glucose-1-phosphate thymidylyltransferase  62.72 
 
 
290 aa  377  1e-103  Magnetococcus sp. MC-1  Bacteria  normal  0.0680028  normal 
 
 
-
 
NC_008686  Pden_2119  glucose-1-phosphate thymidylyltransferase  62.28 
 
 
300 aa  374  1e-103  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
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