7 homologs were found in PanDaTox collection
for query gene AFE_3148 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_2746  hypothetical protein  100 
 
 
184 aa  361  4e-99  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  3.96352e-09  hitchhiker  1.39334e-08 
 
 
-
 
NC_011761  AFE_3148  cytochrome c oxidase, aa3-type, subunit III  100 
 
 
184 aa  361  4e-99  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.000456698  n/a   
 
 
-
 
NC_007777  Francci3_3108  Heme/copper-type cytochrome/quinol oxidase subunit 3-like  27.68 
 
 
239 aa  44.7  0.0008  Frankia sp. CcI3  Bacteria  normal  0.175944  normal  0.345074 
 
 
-
 
NC_008705  Mkms_3353  cytochrome c oxidase, subunit III  27.38 
 
 
203 aa  43.1  0.002  Mycobacterium sp. KMS  Bacteria  normal  0.176455  normal  0.0560155 
 
 
-
 
NC_009077  Mjls_3302  cytochrome c oxidase, subunit III  27.38 
 
 
203 aa  43.1  0.002  Mycobacterium sp. JLS  Bacteria  normal  0.639722  normal  0.219398 
 
 
-
 
NC_009921  Franean1_1809  cytochrome c oxidase subunit III  25.42 
 
 
212 aa  43.5  0.002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0920236 
 
 
-
 
NC_008146  Mmcs_3291  cytochrome c oxidase, subunit III  27.38 
 
 
180 aa  42.7  0.003  Mycobacterium sp. MCS  Bacteria  normal  0.482439  n/a   
 
 
-
 
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