8 homologs were found in PanDaTox collection
for query gene AFE_3146 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_2743  rusticyanin  100 
 
 
187 aa  375  1e-103  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  unclonable  1.72959e-10  hitchhiker  1.44714e-08 
 
 
-
 
NC_011761  AFE_3146  rusticyanin  100 
 
 
187 aa  375  1e-103  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.000525489  n/a   
 
 
-
 
NC_009954  Cmaq_1935  hypothetical protein  30.86 
 
 
258 aa  75.9  4e-13  Caldivirga maquilingensis IC-167  Archaea  normal  0.187916  normal 
 
 
-
 
CP001800  Ssol_2613  blue (type 1) copper domain protein  38.53 
 
 
254 aa  60.5  2e-08  Sulfolobus solfataricus 98/2  Archaea  normal  0.658304  n/a   
 
 
-
 
NC_009954  Cmaq_1483  hypothetical protein  30.52 
 
 
286 aa  59.7  2e-08  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.200109 
 
 
-
 
NC_009440  Msed_0966  blue (type1) copper domain-containing protein  35.85 
 
 
251 aa  59.7  3e-08  Metallosphaera sedula DSM 5348  Archaea  hitchhiker  0.000986426  normal  0.363962 
 
 
-
 
NC_007614  Nmul_A1998  nitrite reductase (NO-forming)  27.38 
 
 
451 aa  43.5  0.002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0185  blue (type1) copper domain-containing protein  29.75 
 
 
315 aa  42.7  0.003  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.312922 
 
 
-
 
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