38 homologs were found in PanDaTox collection
for query gene AFE_1498 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011761  AFE_1498  ABC transporter, periplasmic substrate-binding protein, putative  100 
 
 
307 aa  631  1e-180  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.00436727  n/a   
 
 
-
 
NC_011206  Lferr_1216  extracellular solute-binding protein family 1  100 
 
 
307 aa  631  1e-180  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  unclonable  0.00000000268953  unclonable  0.0000000000401052 
 
 
-
 
NC_007948  Bpro_2497  tungstate/molybdate binding protein  59.64 
 
 
297 aa  346  3e-94  Polaromonas sp. JS666  Bacteria  normal  normal  0.102491 
 
 
-
 
NC_009484  Acry_0010  ABC-type molybdate transport system periplasmic component-like protein  57.19 
 
 
304 aa  340  1e-92  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2123  ABC transporter, periplasmic substrate-binding protein, putative  55.29 
 
 
307 aa  336  2.9999999999999997e-91  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.04669  n/a   
 
 
-
 
NC_012880  Dd703_0707  extracellular solute-binding protein family 1  55.56 
 
 
311 aa  327  2.0000000000000001e-88  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2240  ABC-type molybdate transport system periplasmic component-like protein  44.36 
 
 
341 aa  216  5e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1934  tungstate/molybdate binding protein  36.05 
 
 
317 aa  157  3e-37  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0273271  n/a   
 
 
-
 
NC_007952  Bxe_B1190  tungstate/molybdate binding protein  31.25 
 
 
296 aa  139  7.999999999999999e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.0768198  normal  0.72552 
 
 
-
 
NC_013158  Huta_1022  extracellular solute-binding protein family 1  26.85 
 
 
318 aa  106  5e-22  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009943  Dole_2634  molybdate ABC transporter periplasmic substrate-binding protein  29.76 
 
 
326 aa  106  6e-22  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000000273776  n/a   
 
 
-
 
NC_010003  Pmob_0379  extracellular solute-binding protein  31.2 
 
 
321 aa  105  1e-21  Petrotoga mobilis SJ95  Bacteria  normal  0.961539  n/a   
 
 
-
 
NC_007498  Pcar_2084  molybdate ABC transporter periplasmic substrate-binding protein  29.41 
 
 
354 aa  103  3e-21  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.116873  n/a   
 
 
-
 
NC_010424  Daud_0310  ABC-transporter-like protein, periplasmic substrate-binding protein  28.24 
 
 
275 aa  103  4e-21  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0640  extracellular solute-binding protein family 1  28.68 
 
 
335 aa  103  5e-21  Ammonifex degensii KC4  Bacteria  normal  0.0178146  n/a   
 
 
-
 
NC_013223  Dret_0525  molybdate ABC transporter periplasmic substrate-binding protein  28.43 
 
 
326 aa  102  1e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013926  Aboo_1405  extracellular solute-binding protein family 1  26.67 
 
 
329 aa  98.2  1e-19  Aciduliprofundum boonei T469  Archaea  normal  0.692378  n/a   
 
 
-
 
NC_012029  Hlac_1225  extracellular solute-binding protein family 1  27.24 
 
 
306 aa  97.4  3e-19  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  hitchhiker  0.00000686455 
 
 
-
 
NC_009253  Dred_1849  ABC-type molybdate transport system, periplasmic component  27.64 
 
 
274 aa  96.3  6e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2087  molybdate ABC transporter periplasmic substrate-binding protein  27.42 
 
 
327 aa  96.3  7e-19  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  8.28403e-19  n/a   
 
 
-
 
NC_013512  Sdel_2058  extracellular solute-binding protein family 1  31.18 
 
 
316 aa  95.9  8e-19  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00930598  n/a   
 
 
-
 
NC_013131  Caci_8652  extracellular solute-binding protein  26.94 
 
 
309 aa  91.3  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_2302  extracellular solute-binding protein family 1  31.51 
 
 
636 aa  89  9e-17  Methanosphaerula palustris E1-9c  Archaea  normal  0.319071  normal  0.250502 
 
 
-
 
NC_013173  Dbac_2354  molybdate ABC transporter periplasmic substrate-binding protein  27.63 
 
 
325 aa  87  3e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  unclonable  0.00000000506174  n/a   
 
 
-
 
NC_013202  Hmuk_1406  extracellular solute-binding protein family 1  24.33 
 
 
314 aa  83.2  0.000000000000005  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.130817  normal  0.506549 
 
 
-
 
NC_013743  Htur_1653  extracellular solute-binding protein family 1  25.1 
 
 
323 aa  82.8  0.000000000000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013216  Dtox_0979  hypothetical protein  27.88 
 
 
273 aa  80.5  0.00000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000446553  normal  0.0586642 
 
 
-
 
NC_009635  Maeo_1470  molybdate ABC transporter periplasmic substrate-binding protein  29.14 
 
 
349 aa  80.5  0.00000000000004  Methanococcus aeolicus Nankai-3  Archaea  normal  0.811914  n/a   
 
 
-
 
NC_009634  Mevan_0954  molybdate ABC transporter periplasmic substrate-binding protein  24.73 
 
 
330 aa  76.3  0.0000000000007  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1019  molybdate ABC transporter periplasmic substrate-binding protein  24.65 
 
 
347 aa  74.3  0.000000000002  Methanococcus maripaludis C6  Archaea  normal  0.884237  n/a   
 
 
-
 
NC_009135  MmarC5_1756  molybdate ABC transporter periplasmic substrate-binding protein  24.58 
 
 
347 aa  73.2  0.000000000005  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_1880  extracellular solute-binding protein  25.69 
 
 
355 aa  73.2  0.000000000006  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0925  molybdate ABC transporter periplasmic substrate-binding protein  24.3 
 
 
344 aa  71.6  0.00000000002  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009440  Msed_1780  tungstate/molybdate binding protein  29.62 
 
 
366 aa  70.5  0.00000000003  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_2001  extracellular solute-binding protein family 1  23.34 
 
 
402 aa  66.6  0.0000000005  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_008942  Mlab_1025  tungstate/molybdate binding protein  26.51 
 
 
328 aa  63.5  0.000000004  Methanocorpusculum labreanum Z  Archaea  normal  0.0403292  normal 
 
 
-
 
NC_009954  Cmaq_0507  ABC-type molybdate transport system periplasmic component-like protein  28.8 
 
 
393 aa  63.5  0.000000005  Caldivirga maquilingensis IC-167  Archaea  normal  0.701895  normal 
 
 
-
 
NC_008010  Dgeo_2499  molybdenum ABC transporter, periplasmic molybdate-binding protein  25.64 
 
 
258 aa  44.7  0.002  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
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