8 homologs were found in PanDaTox collection
for query gene AFE_0048 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_0049  TQO small subunit DoxD  100 
 
 
360 aa  723  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.336804  normal 
 
 
-
 
NC_011761  AFE_0048  DoxD-like family protein  100 
 
 
360 aa  723  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0045  TQO small subunit DoxD  70.89 
 
 
360 aa  508  1e-143  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.191442  normal 
 
 
-
 
NC_011761  AFE_0044  DoxD-like family protein  70.89 
 
 
356 aa  507  1e-142  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_1324  TQO small subunit DoxD  33.73 
 
 
353 aa  162  6e-39  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_2675  TQO small subunit DoxD  30.22 
 
 
173 aa  63.2  6e-09  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009440  Msed_0363  TQO small subunit DoxD  32.21 
 
 
182 aa  62.4  1e-08  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_2555  TQO small subunit DoxD  30.97 
 
 
180 aa  60.8  4e-08  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
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