11 homologs were found in PanDaTox collection
for query gene AFE_0010 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_0011  hypothetical protein  100 
 
 
144 aa  290  6e-78  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.808442  normal  0.0183228 
 
 
-
 
NC_011761  AFE_0010  hypothetical protein  100 
 
 
144 aa  290  6e-78  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_010373  M446_7004  hypothetical protein  44.85 
 
 
139 aa  115  2e-25  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4439  hypothetical protein  41.48 
 
 
147 aa  109  1e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0486  hypothetical protein  44.95 
 
 
151 aa  91.7  3e-18  Cyanothece sp. PCC 8802  Bacteria  normal  0.240352  normal  0.886506 
 
 
-
 
NC_007595  Synpcc7942_B2640  hypothetical protein  35.97 
 
 
143 aa  79.7  1e-14  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2416  hypothetical protein  41.49 
 
 
123 aa  79.3  2e-14  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.82077  n/a   
 
 
-
 
NC_011726  PCC8801_2709  hypothetical protein  38.98 
 
 
91 aa  45.4  0.0002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3394  hypothetical protein  38.98 
 
 
91 aa  45.4  0.0002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.46136 
 
 
-
 
NC_009943  Dole_0127  hypothetical protein  32.88 
 
 
90 aa  44.3  0.0006  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00495666  n/a   
 
 
-
 
NC_007492  Pfl01_4899  hypothetical protein  26.87 
 
 
148 aa  43.9  0.0007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.348391  normal 
 
 
-
 
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