13 homologs were found in PanDaTox collection
for query gene A2cp1_2168 on replicon NC_011891
Organism: Anaeromyxobacter dehalogenans 2CP-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011891  A2cp1_2168  LuxR family transcriptional regulator  100 
 
 
122 aa  239  1e-62  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2057  LuxR family transcriptional regulator  65.25 
 
 
137 aa  152  2e-36  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.773871 
 
 
-
 
NC_013216  Dtox_1947  transcriptional regulator, ArsR family  36.75 
 
 
119 aa  73.9  0.0000000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3531  regulatory protein, ArsR  40.35 
 
 
339 aa  73.6  0.0000000000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1838  LuxR family transcriptional regulator  43.86 
 
 
122 aa  72  0.000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1872  LuxR family transcriptional regulator  35.4 
 
 
120 aa  63.2  0.000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.633218 
 
 
-
 
NC_012791  Vapar_2886  transcriptional regulator, ArsR family  34.21 
 
 
120 aa  55.8  0.0000002  Variovorax paradoxus S110  Bacteria  normal  0.23508  n/a   
 
 
-
 
NC_007958  RPD_0725  hypothetical protein  35.92 
 
 
111 aa  54.3  0.0000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.617739 
 
 
-
 
NC_011830  Dhaf_1088  hypothetical protein  34.95 
 
 
116 aa  52  0.000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000469359  n/a   
 
 
-
 
NC_008392  Bamb_5911  LuxR family transcriptional regulator  40.74 
 
 
115 aa  50.8  0.000007  Burkholderia ambifaria AMMD  Bacteria  normal  0.116094  decreased coverage  0.00152039 
 
 
-
 
NC_010338  Caul_3258  hypothetical protein  38.82 
 
 
115 aa  47.4  0.00007  Caulobacter sp. K31  Bacteria  normal  0.317122  normal  0.791915 
 
 
-
 
NC_008009  Acid345_0270  hypothetical protein  33.02 
 
 
111 aa  45.8  0.0002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.190773  normal 
 
 
-
 
NC_010172  Mext_0749  hypothetical protein  30 
 
 
111 aa  41.6  0.004  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
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