Gene Aazo_4355 details

Gene Information

• Locus tag: Aazo_4355
• ID: 9342160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: +
• Start bp: 4433353
• End bp: 4436931
• Gene Length: 3579 bp
• Protein Length: 1192 aa
• Translation table: 11
• GC content: 40%
• Product: TPR repeat-containing protein
• Protein accession: YP_003722816
• Protein GI: 298492639

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.862224
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGCAAA TGCTCAGGTG GCTATTGCAG TGGCTTAACA GGTTTATGAA GTATCCTTTT 
AACAGTCGTC GGACTCATGA TGCCAACGAT AAAAAGGGTC ATCAGGTGGT AGAGTCTCTA 
CCTGAATTAA CCAATGCTGA TCTAGAAGTA TTGTTTAACG AGCTGCTTGA AGGTGTGCAT 
CAGGCGCGGG GAAAACAATG GGCGCTGAAG TATTTGCAGC GGATGGAACC ACGAATTACT 
GTTGAACGTT GGATAGATTG GCTGCTGATA TTTGGTGAAA GATTGTTATC TTCACCTGCA 
CCAAATAGTC AGATAGCAAC GCGAATGGTT AAATTGGGTG AACTCGATGT TGGTAAAGTT 
GGTGAACTTG CATCAGAAAT TGGTGTCCAG CTATTGAGTC GTGAGTTTTT AGCCCAAAGG 
TATGTCGAGA ATCCACAAGC AGTGGAGGTG GAAACAGCAG TAGCAGTAGT GGCAGATACT 
CCTGGGCAAC AATTACTGCG GGACTTTGGT GAAGAGTTAT GGGAGCATGA TCAGGAAGAA 
CCGGTGAACA ACATCACACC AGTATCCTTA AGCTTGGAGG AATCATGGAC AGGGAACTCA 
GAACAGTGGA GTGCTCAAAA TTTAGAACAA CATACATCTG AGGCTGTTAT TTTTGAGTAT 
GTCCAGGAAG ATAATCCCAC TGCGATTGAG GAAGTAGAAT CTGTTAGTGA TTCTTCTTTG 
GCAGAGAATT GGGATCAGTG GCTGGTAAGT TTAGAGCCCA AGGTGGCACA TACTCTGGAT 
GAGTTGGTGG TAAGGTTGGA GCAAAGCACC AATTTAGTCC AGCAACTTGC TTCTGAATTA 
GCTATTCGCG ATGAACGCCA AGCATTAATT CAGCGTCCTA GTTTTCAAAT AACTGTAACT 
AATCAAGCTC AAGCATGGTT TTATCAAGGT TTACAGCAAG CTAAATCTGG CGATTTGTTA 
GGGGCGCTGG CTTTTTATAA TCAAGCTACT AAACTAGAAC CAGAATCGGC TGAGTATTGG 
TTTAATCAAG CTTTAACCTT ATTCCATTTA AAACGTTTTG AAGAAGCGAT CGCAGCCTAT 
GACCAGGCGA TCGCACTCAA GCCAGATTTC TTTAAAGCCT GGTATAATCG GGGGGGAATT 
ATGGTCGAAT TTGGCGACTT TGACGGAGCG ATCACTTCTT TTGACAAGGC TATAGAATTG 
CAACCCAACT ATCAAGAAGC TTGGTCTAGT AGGGGTTTAG CGCTGCTGAA ATTAGGACTG 
ATTTGGGAAG CAATTTCCAG TTATGACCAA GCCTTGGAGT TACAACGCCA AGACCAGGAA 
ACTTGGTATT ATCGAGGAGT TGCCTTGGCT GTAGGAGAGC AATATGAAGA TGCGATCGCC 
TCATACAACC AAGCTATAGA AATTCAACCA GACTATCACG AAGTTTGGAT TGACCGGGGA 
GTAGTCTTAT TTAACCTCAA GCGCTGGTCA GAAGCCATTG AATCCTGGGA TCAAGCCCTC 
TCTATTCAAC CAGACTTTTA CTTAGCCTGG TATAACCGAG GCATCGCCTT GGAAAACCTA 
GCCAGACGAG AAGAAGCCAT TACTTCCTAT CAAAAAGCGA TCACCATTAA ACCCGACTTT 
CACCCTGCAT GGTACAACCA AGCCGTAGCC TTCTATTATT TAAATAGATT TGCAGAAGCC 
ATTTCTTGCT ATGACAGCGC CTTAGAAATC AAACTAGACT ACTGGGAAGC TTGGCTTGGT 
CGTGGTGGAG CCGTTGGTAA CTTAGTCAAT GACAAATTCT CCCTGAGTTT ATCCAGTACT 
ATAGCCGCAT CCAATCCCAA TCTAAATCAG CTTGGCTATG AGGGCAAATT AGCCACATAT 
CAAGAAGGCT TTAAATATCT TCGTCCAGAT ACTCACCCCG AAGGTTGGGG AAGATTGCAT 
CTAGCTGCTG GTAATACACA TTACGAACAC GGCAAAAAAC AATCCACACC CCGCTATTTT 
TGGCAAAAAG CCGTATCTGA ATACCAACAG GCACTCTTAA CCCTCACAGC CGAAGATTTC 
CCAGAATTAC ATCTTGATGG TTTACAATCT CTCACCAAAG TGCTTATCCG TTTGGGACAA 
ACAGTAACAG CCCAAGAATT ACACCAACAT GGACTAGGCT TATTACAACA ATTACTTAAT 
CAAACAACCC GTCCTGAACA CAGTAAGAAA CAACTAGCTT TAAAATTTGC GGGTTTAAGA 
CAAATGGGAG TTGACTTAGC AGTCAATATA GGTGATTTAG TAGAATCTTG GGAAATTGCC 
GAACATTGTA AAAATACCTG TTTAAAATTA CTGCTTTCTG ATTGCCATGA TGAAATTTAC 
TCTCCCAACT ATGAAGCCAT TCAACCTCTA CTAAATTCTA CAACAGCCGT GATTTACTGG 
CATCTTAGTC CAGCAGCCTT ACACACCTTC ATTATTAAAC ATGAAGCTCC TTCACCCATA 
CTGTTATTAA CACCAATACA AGATATAGAA GCTATACCCG AAGCCGTGCA ACGTCTAGTT 
GAATTTGAAA ACTGGCTAGA AGATTGGGAA AAACAATATC AAGAATATCG TCAAATACAA 
GATATAGAAA ATCAGTACAA ACATTCTTGG TGGGTAGATA TAGAACAGAA GTTGTTACAA 
CTGCAAAACA TCCTCAATAT TTCTACAATT ATTCAAGAAC TTGAAGGTAT CTCCAAACTG 
ATTGTAATTC CCCATGGTGA TTTACATAAA TTACCTATCC ACGCACTTTT TCCACTCAAT 
CAGAAAAATT CACTCAATTA CACCATCAAC TATTTACCCA GTATCCAAAT AGGCCTGGAC 
TTAAAAACAT ATTCATTATC AAATTGGCAA CAGCAAAAGT TCCTCAGTGT TGAAAATGTA 
GAACATACAA ATGATAGCCA GATAAAATGT GCTGATTTTG CATCGGCAAT TATCAGAAAA 
ATGTTTGATA ATGCCCAACA TATCCAAGGT TCACAAGTTA CGCAAGATAA TATCGAAAAT 
GCCTTAGCGG CAGATTACAA TATCTTTCAC TTTACTGGTC ATGCTATCAA CAATTTGAGT 
GAAGCTCAAA AATCAGCTTT AGTTTTAACA AGTGAAGAAA AACTGACTCT AGCAGAAATT 
AGTCAACAGA CTTTTAATAC TTACAATCTG TTTACTCTCC CAAATTGTGA AATGGTTAGT 
AATCACAGTC AGAATATCAA CAGTGAATAT GTGGGTTTAG CAGCTGGTTT ACTAATTCGT 
GGAGTTCCAG AAGTGTTGAG TACACTTTGG ATTGTTGAAT CATCTGCGAC AGCTTTAGTA 
ATTATCGAAT TTTATCGCAG ATTACTTTTC CATAAATCTC CAGTTACTGC TTTAGCTGAA 
GTCACAACTT GGCTGAGAGA TATAACAGTT GGTGAACTAA TCACATGGTA TGAAGATTTA 
CTCACTAATC TGCATTCAGA TGAAGTTAAA TTGAGGAATT ATGTAATGAT GGAAGTTGAT 
AAATATCGTC AGTTATCACC TCACAAACAG CCTTATCAGC ATCCTTATTA TTGGGCTGCA 
TTTATCATTA CAGGATGCGT TCAAGCAGAT GAGAATTGA 

 

Protein sequence

MWQMLRWLLQ WLNRFMKYPF NSRRTHDAND KKGHQVVESL PELTNADLEV LFNELLEGVH 
QARGKQWALK YLQRMEPRIT VERWIDWLLI FGERLLSSPA PNSQIATRMV KLGELDVGKV 
GELASEIGVQ LLSREFLAQR YVENPQAVEV ETAVAVVADT PGQQLLRDFG EELWEHDQEE 
PVNNITPVSL SLEESWTGNS EQWSAQNLEQ HTSEAVIFEY VQEDNPTAIE EVESVSDSSL 
AENWDQWLVS LEPKVAHTLD ELVVRLEQST NLVQQLASEL AIRDERQALI QRPSFQITVT 
NQAQAWFYQG LQQAKSGDLL GALAFYNQAT KLEPESAEYW FNQALTLFHL KRFEEAIAAY 
DQAIALKPDF FKAWYNRGGI MVEFGDFDGA ITSFDKAIEL QPNYQEAWSS RGLALLKLGL 
IWEAISSYDQ ALELQRQDQE TWYYRGVALA VGEQYEDAIA SYNQAIEIQP DYHEVWIDRG 
VVLFNLKRWS EAIESWDQAL SIQPDFYLAW YNRGIALENL ARREEAITSY QKAITIKPDF 
HPAWYNQAVA FYYLNRFAEA ISCYDSALEI KLDYWEAWLG RGGAVGNLVN DKFSLSLSST 
IAASNPNLNQ LGYEGKLATY QEGFKYLRPD THPEGWGRLH LAAGNTHYEH GKKQSTPRYF 
WQKAVSEYQQ ALLTLTAEDF PELHLDGLQS LTKVLIRLGQ TVTAQELHQH GLGLLQQLLN 
QTTRPEHSKK QLALKFAGLR QMGVDLAVNI GDLVESWEIA EHCKNTCLKL LLSDCHDEIY 
SPNYEAIQPL LNSTTAVIYW HLSPAALHTF IIKHEAPSPI LLLTPIQDIE AIPEAVQRLV 
EFENWLEDWE KQYQEYRQIQ DIENQYKHSW WVDIEQKLLQ LQNILNISTI IQELEGISKL 
IVIPHGDLHK LPIHALFPLN QKNSLNYTIN YLPSIQIGLD LKTYSLSNWQ QQKFLSVENV 
EHTNDSQIKC ADFASAIIRK MFDNAQHIQG SQVTQDNIEN ALAADYNIFH FTGHAINNLS 
EAQKSALVLT SEEKLTLAEI SQQTFNTYNL FTLPNCEMVS NHSQNINSEY VGLAAGLLIR 
GVPEVLSTLW IVESSATALV IIEFYRRLLF HKSPVTALAE VTTWLRDITV GELITWYEDL 
LTNLHSDEVK LRNYVMMEVD KYRQLSPHKQ PYQHPYYWAA FIITGCVQAD EN