Gene Aazo_3950 details

Gene Information

• Locus tag: Aazo_3950
• ID: 9341754
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: +
• Start bp: 4010734
• End bp: 4012788
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 42%
• Product: DNA ligase, NAD-dependent
• Protein accession: YP_003722567
• Protein GI: 298492390

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCAAA TGACTTCTGA AGCCCAGCTT GTACGAGAAT TGCGGCTGTT ATTACAACAA 
GCCAGTTATG CTTACTATGT TCTTGATGCA CCAGTTATGG AAGATATGGT TTATGATAGA 
CTGTATCGAG AATTACAAGA ACTAGAAACG CAATACCCAT ACTTAGTCAC TCCTGATAGT 
CCAACTCAGC GCGTGGGTGA ACGACCTGCA ACCCATTTCA CCTCAGTACG GCATAACATA 
CCTCTGTATA GTTTGGAAAA TGCTTTTAAT GTTGAGGAAT TACAAGGTTG GGATCAACGT 
TGGCGAAGAC ACTTAATGGC TCAGTATTAT CCAGTAGAAG TTGACTATGT TGCAGAATTG 
AAAATTGATG GTGCTGCTTT GGCGCTAACT TACCAAAATG GTATTCTGGT GAGGGGTGCG 
ACCAGGGGTG ATGGGGTGAT GGGTGAAGAT ATTACCCAAA ATGTGCGGAC TATTCGCTCA 
ATTCCACTAC GTTTGAATTT TGACGGTTTG GAAAATATCG AAAAGGTGGA AGTACGGGGA 
GAAGTATTTT TACCTTTGGA GGTGTTTAAA CAAATTAATG AGAAAAGACA AAAAGCAGGT 
GAGCAGTTAT TTGCTAACCC GCGTAATGCT GTGGCTGGTA CACTTAGGCA GTTAGATTCC 
CGCATTGTCG CGCAGCGTCA GTTGGATTTT TTTGCTTATA CTGTGCATAT TCCGGGGATG 
GATGATGCGA GTATTGCGAA TACTCAATGG GAAGCTTTGG AGTTGTTACA AAGGCTCGGT 
TTTCGTGTTG ATACTAACCA TAGGCTGTGC CATTCGATTA GGGAAGTTGC TGAATATTAC 
GAATATTGGG ATACTGAACG GCTGAATTCT CCCTATATGA CTGATGGGGT GGTAGTAAAA 
TTGAACACTT TTAAGCTGCA AGAACAACTA GGGTTTACAC AGAAGTTCCC TCGTTGGGCA 
ATCGCTCTTA AATACGCAGC AGAGCAAGCA CCTACCCGTG TAAACAATAT TACTATTAAT 
GTGGGTAGAA CGGGGGCTTT AACTCCTTTG GCAGAAATGC GTCCCGTACA ATTAGCAGGT 
ACTACTGTGT CTAGAGCTAC CTTACATAAT AGCGATCGGA TTCAGCAATT AGATATCCGC 
ATTGGTGATA CAGTCATTGT CCGCAAAGCT GGGGACATCA TCCCAGAAGT CGTACGGGTA 
ATTAAAGAAC TCCGTCCGTC TGACACTGCA CCATTCATTA TGCCTAGTCA TTGTCCCATA 
TGTGGTCAAC CGGTGGTGAG AGAATCAGGG GAAGCGGTGA CAAGATGTGT AAGTGCTTCC 
TGTGCGGCTA TTCTCAAAGG AGAGATCGAA CATTGGGTAA GTCGGGATGC CTTGGATATT 
AAAGGTATGG GTGAAAAACT GGTACATCAA CTGGTAGATA AAGAGTTAGT GCTTTCTGTG 
TCCGATTTAT ACAAATTGAT AAAAGAAGAG TTATGTGCAT TAGAACGGAT GGGTCAAAAA 
TCTGCACAAA AATTAGTGAA TGCGATCGCC CAATCAAAAA ATCAACCTTG GTCTAGAGTA 
TTATACGGTT TAGGGATTCG TCATGTTGGC AGCGTTAACG CTCAACTATT GACTGAGAAA 
TTTACCACAG TGGAACAGTT AGCAGCTGCA AAACAATCAG ATATTGAAGG TGTTTACGGT 
ATAGGTGCAG AAATTGCTCA ATCAGTTTAT CAGTGGTTTC GTACCCCTGC CAATCAAACT 
TTAATTTCTC GTCTCCAAGA CATCGGATTA CAATTAGCCA ACACCGCAGA AACAAAGCCA 
GTAGGTGAAA TTAATCCTAA CTTGGCTGGT AAAATTTTCG TAGTCACAGG TACATTACCC 
ACCTTAAAAC GTGACGAAGC AAAAGTACTA ATTCAAAAAG CTGGCGGGAA AGTAACTGAT 
TCCGTAAGCA GGAAAACTGA TTTTTTAGTT GTAGGTGCAG ACGCAGGTTT TAAGGTAAAA 
AAAGCGCAAT CTTTGGGAAT TACTCAGTTA ACTGAAACAC AATTATTAAA GATGTTGGAG 
GTTTCAGAAA ACTAG 

 

Protein sequence

MMQMTSEAQL VRELRLLLQQ ASYAYYVLDA PVMEDMVYDR LYRELQELET QYPYLVTPDS 
PTQRVGERPA THFTSVRHNI PLYSLENAFN VEELQGWDQR WRRHLMAQYY PVEVDYVAEL 
KIDGAALALT YQNGILVRGA TRGDGVMGED ITQNVRTIRS IPLRLNFDGL ENIEKVEVRG 
EVFLPLEVFK QINEKRQKAG EQLFANPRNA VAGTLRQLDS RIVAQRQLDF FAYTVHIPGM 
DDASIANTQW EALELLQRLG FRVDTNHRLC HSIREVAEYY EYWDTERLNS PYMTDGVVVK 
LNTFKLQEQL GFTQKFPRWA IALKYAAEQA PTRVNNITIN VGRTGALTPL AEMRPVQLAG 
TTVSRATLHN SDRIQQLDIR IGDTVIVRKA GDIIPEVVRV IKELRPSDTA PFIMPSHCPI 
CGQPVVRESG EAVTRCVSAS CAAILKGEIE HWVSRDALDI KGMGEKLVHQ LVDKELVLSV 
SDLYKLIKEE LCALERMGQK SAQKLVNAIA QSKNQPWSRV LYGLGIRHVG SVNAQLLTEK 
FTTVEQLAAA KQSDIEGVYG IGAEIAQSVY QWFRTPANQT LISRLQDIGL QLANTAETKP 
VGEINPNLAG KIFVVTGTLP TLKRDEAKVL IQKAGGKVTD SVSRKTDFLV VGADAGFKVK 
KAQSLGITQL TETQLLKMLE VSEN