Gene Aazo_1400 details

Gene Information

• Locus tag: Aazo_1400
• ID: 9339195
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: -
• Start bp: 1473142
• End bp: 1473825
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 45%
• Product: TrkA-N domain-containing protein
• Protein accession: YP_003720768
• Protein GI: 298490591

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGTGC TAATTGGTGG AGCAGGCTTA GTAGGGCTGT CTTTGGCTCA AAAGTTGGTA 
GAACTAGGAC ATACTGTTGC CATTATTGAT ATTGACCCCA CTGCCTGCCG CTACGCCCGT 
GAACAAGTCG GAGCTATGGC TTTTGAAGGC AGTGCTGTGA GTACAGAAGT GTTGTTAGAA 
GCTGGAATTC GTAAAGCAGA TTCCTTAGCA GCTGTCCTCA GAAGTGATGC TTTAAACTTA 
GCGATGGTAA CTCTTGCCAA GCACTACGGT GTTCCCCATA TGATCAGTCG AATGCGTCAC 
CCCGATTTTG TCGAACCGCT TCGTCTGGCA GGAGCAAACC ATATTATCAG TACCGTCGAG 
CTAGCAGTTT CCACAATGGT GAATGCCATT GAGTATCCCC AAATAGAATC AATGATGCAT 
TTTGACCAGG GGCAGATTGA GGTTTTAAAA CTCGCTATTC CCAACAGTTG TTATGTAGCT 
AGTCGCAGCG TTGCTGAAAT TGCTCAAGAT TCTCGGTTTC CCACTGGCTC ACTAATTATC 
GGCTACCAAC CTCTTCCTCA CGAGGATTTA ATGATTCCTA ATGGTAGTAC AGTGCTAGAA 
CCAGGTTCGA CTGTACTGAT TGTGACTAAA CCAGGATGTT TACACCAAGT TATTGATTTT 
ATCGAAGGTT GTGAGAACAG GTGA 

 

Protein sequence

MYVLIGGAGL VGLSLAQKLV ELGHTVAIID IDPTACRYAR EQVGAMAFEG SAVSTEVLLE 
AGIRKADSLA AVLRSDALNL AMVTLAKHYG VPHMISRMRH PDFVEPLRLA GANHIISTVE 
LAVSTMVNAI EYPQIESMMH FDQGQIEVLK LAIPNSCYVA SRSVAEIAQD SRFPTGSLII 
GYQPLPHEDL MIPNGSTVLE PGSTVLIVTK PGCLHQVIDF IEGCENR