Gene CA2559_13643 details

Gene Information

• Locus tag: CA2559_13643
• ID: 9298220
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: -
• Start bp: 2943807
• End bp: 2945804
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 32%
• Product: OmpA family protein
• Protein accession: YP_003717470
• Protein GI: 298209291

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.830628
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAAG GAACACATTA TCTTATGAAG AATACTTTAC TACATACACT CTTTTTTTCT 
TGTTTTCTCT TAATTTCAGT TTTAGGACAA GCACAAGAAA AACAATTAGA AAAAGCAGAT 
CAGAAATATG ATCGCTATGC ATTTATTGAT GCACAAAAAA TATATTTGAA AGTTGCTGAA 
GAAGGCTATA GGAGCCCTCA GTTATTTAAA AGATTAGGAA ATTCATATTA TTTTAATGCA 
GAGTTTGAAG ATGCTGCCAA ATGGTATGGA GAATTAATGA AAGATGCTAC TAATGATGTG 
GAGTCTGAAT ATTACTTTAG ATATTCTCAA TCACTAAAAG CATTAGAGAA GTATGACGAA 
GCAGATAAAT GGATGATGAA GTTTAACACC TTTAGCTCTA AAGATGATAG AGCTTATCTG 
TTTACAGAAC AACCAGATTA TTTAAGAGAG ATAAACTATA ATTCAGGTAG TTATGAGATT 
ACTAGAACTG CTATAAATTC AACTTACTCA GATTTTGGAA CCGCTTTTAG TGAAAACAAA 
CTTGTTTTTG CCTCTTCTAG AGATACTGGA GCTTTTATAA AACGTATTTA TGAATGGACA 
GGAGATCCTT TTTTAGATTT ATATGAGGTT TCAATAAACC CTGCGAATGG TGAACTTTCT 
GAAGTTAAAA AGTATAAAGG AAATCTCAAC TCAATTTTCC ATGAATCAAC TCCAGCCTTC 
ACAAAAGACG GTAATACAGT TTACTTTACT AAAAATAATT ACAATAATGG TAGTTACAGA 
GAAGATGAGA AAGGGACAAA CAAGCTAAAA TTATATAAAG CAACACGTTC TTCTGATTCT 
AAAGATTTTG GGACACCTAA AGAAATGCCA TTTAATAGTG ATGAGTATTC AACAGCACAT 
CCTACGTTAA GTCCAGATGA GAAAAAATTA TTCTTTTCAT CAGATATGCC AGGTAGTGAA 
GGCCTCTCAG ATATTTGGGT AGTAGATATT CTTTCAGATG GTTCATATAG TGAACCAAGA 
AATTTAGGAG AAGGAATAAA TACAGCAGGA AGAGAAACGT TTCCATTTAT GACAGCTAGT 
GGTGATATGT ACTTTGCATC AGATGGTCAC ATTGGTTTAG GAGGACTAGA TATCTTTGTC 
ACTAATGTTA CAGATGCAGA AACAATTTCC GAAATAATAA ATATTGGAGA ACCAGCTAAT 
AGCTCAAGAG ATGATTTTGC TTTTGTGATT GATGAAGACA CAAAATTTGG ATATTTATCT 
TCAAATAGAA ATGGAGGCTT AGGTGATGAT GATATTTATA GATTTAAACA ATTAAAGGAA 
CATAAACTAT TTTGCGAGGT TATCGTAATG GGAGTTGTAG TAGATAAAGA TTCTGGCCAA 
TTAATTCCTG GAGCAAAAGT TTCTTTAGTA GATGGCAATA ACAATGTAAT TAAAAGCCTT 
ACAGTTGGAG ATCGTGCTAA TTATGCATTT GTTACAGAAT GTGAAACGCA GTATTTCTTA 
AGAGCTACTA AAGAAGATTA TATTGGCGAT GAAAAATTAT TTACCACTCC AACAGAAAGC 
CAAATGGTTG AACTAGACTT AATGTTAGAA AAGGAAATTG TAAAAGCTGA AGTTGGTGAT 
GATATAGGCA AATTATTAAA ATTAGAACCT ATTTATTTTG ACTTTGATAA ACATAATATT 
AGACCAGACG CAGCAGTTGA GTTAGCTAAG GTAATAGCTG TAATGAATGA ATATCCAGAA 
ATGAAGATAG ATGTTAGGTC TCACACAGAT AGTAGAGGTA AAGACGACTA TAATATGAGA 
TTGTCTGAAC GAAGAAATAA ATCTACAATT AATTATATAG TAGAGCGTGG CGGAATATCT 
AGAGATAGAT TAACAGGAAG AGGATATGGA GAATCTGAGT TAATTAACGA GTGTGCTAAT 
GGTATACCTT GCTCTAGAGA GAAACACGAA TTAAACCGTA GATCTGAATT TAGAATTGTT 
CAAATTTCAG AAGAGTAA 

 

Protein sequence

MSKGTHYLMK NTLLHTLFFS CFLLISVLGQ AQEKQLEKAD QKYDRYAFID AQKIYLKVAE 
EGYRSPQLFK RLGNSYYFNA EFEDAAKWYG ELMKDATNDV ESEYYFRYSQ SLKALEKYDE 
ADKWMMKFNT FSSKDDRAYL FTEQPDYLRE INYNSGSYEI TRTAINSTYS DFGTAFSENK 
LVFASSRDTG AFIKRIYEWT GDPFLDLYEV SINPANGELS EVKKYKGNLN SIFHESTPAF 
TKDGNTVYFT KNNYNNGSYR EDEKGTNKLK LYKATRSSDS KDFGTPKEMP FNSDEYSTAH 
PTLSPDEKKL FFSSDMPGSE GLSDIWVVDI LSDGSYSEPR NLGEGINTAG RETFPFMTAS 
GDMYFASDGH IGLGGLDIFV TNVTDAETIS EIINIGEPAN SSRDDFAFVI DEDTKFGYLS 
SNRNGGLGDD DIYRFKQLKE HKLFCEVIVM GVVVDKDSGQ LIPGAKVSLV DGNNNVIKSL 
TVGDRANYAF VTECETQYFL RATKEDYIGD EKLFTTPTES QMVELDLMLE KEIVKAEVGD 
DIGKLLKLEP IYFDFDKHNI RPDAAVELAK VIAVMNEYPE MKIDVRSHTD SRGKDDYNMR 
LSERRNKSTI NYIVERGGIS RDRLTGRGYG ESELINECAN GIPCSREKHE LNRRSEFRIV 
QISEE