| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_12568 |
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| Symbol | |
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| ID | 9298004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Croceibacter atlanticus HTCC2559 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014230 |
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| Strand | + |
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| Start bp | 2725871 |
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| End bp | 2728159 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | |
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| Product | probable TonB-dependent receptor YncD precursor |
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| Protein accession | YP_003717255 |
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| Protein GI | 298209076 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCC ACCTTTTAGT AGTGTTTAGC TTTTTTGCTA TAGCTACCAC TTACGCCCAA
ACCAACAATA CTGAAATTCT TATAGTTTCT GAAGATAACA TACCTCTCGA AGATGTAATA
GCCTATAAAT CTTCTAATGT AATTGCCACC TCCAACGATA AAGGCATTCT TTCTTTTAAA
AATCCGTCTA CTGAAGAGTT TATTTTAAGA TTAACTTTAA AAGACTTTAA ACCTGTAAGC
CTTAAAATTT CACCCAATAC ATTTAAATAT ACTGTAGTTC TTTCAAAAGC TGAAGAGGAG
CTTAATACAG TAATTCTCGC ATCTACCTAT CAAAAAGAAA GTAAGGTTTT AATACCTACA
ACATCTGTTA CCGCAGAAAG TATTGCCGAA GGCTCACCAA TAGATTTAGT AGATGCCATA
AACGAAACAA GTGGTGTTTA TATACAACGC GGAGCAATTA ACACAAATAG AATCACTATT
CGTGGTATTG GTTCCAGAAC ATTATTTGGC ACCAATAAGA TTAGAGCCTA CTTTAATGGG
TTTCCCATTA CTAATGGTAT AGGCGAAACA GCTATCGATA TTTTTAACAC GCAAGATATT
GCTAGTATAG AAATTATTAA AGGGCCAAAA GCTACCCAAT ATGGTGCTAA TCTTGGAGGT
ACATTATTGT TAAACTCTAA AGACCCCAAA AAGGAAGGTT TAGTTTTAAA AAATACGGTA
ACCATTGGCT CATTCGAGTT GTTTAAAGAG AGTTTATCCT TAAACTTGAA GGAAGACAAA
CTTTCATTAC ATCTAAATGC AGATCACCAA GAACATGAAG GTTATAGAGA AAACAATCGT
TATAATAGAA ATGCATTATT TATAAACACG TCCTACACTT TAAATAAAAC ATTTACCATA
AATGGTTTGG TGCAACATAT AAATAACTTT GCCCAAATTC CTAGTTCTCT AAATCTTACA
GATTTTAATG AAGACCCGAC GCAAGCTGCA TTTACATGGG CACAATCTCA AGGTTTTGAA
GACAATAGGC AAACATTAGT AGGACTTGGC CTTTCCTCTA ATATTTCAGA TTCTTGGAGT
AATGCCACTA ATGTATATTA TAGTTATTTA GACCACTATG AGCCTAGACC TTTTAATATA
CTTGCAGAAA TTACAAATAC TTATGGCGTT CGAACAGTTT TTGCAAATAC ATTTAACCTT
AACATGAAAA GTGCAAATTT AAGTTTTGGA GTAGAGTTTA ACCAAGACCA CTATGTAGTG
ACTACAACTG AAAATTTATA TGAAGACAAT AATGGTAATG GAAGCTTAGA AGGTAGTTTA
TTAAGTGATA ATACAGAGAT TAGATCACAG CTTCAACTGT TTGGAACAAG TACTTTACCA
ATTACAGAAA AACTAACGGC AGAAATAGGT TTGCATTTAA ATAAAACTTC TTACAACTTA
GATGACAATT TTAATGAAGC TGAAGCTAAC ACAAGTGCAG ACAGAGAATT TGATATTATT
GTTGCTCCAA ATCTTAGTTT GCTTTACAAG CTTAATAATA CTGTAACTAC GTATTTAAAC
ATTAGTAGAG GATTTAATTA CCCAAGTTTG GAGGAAACTC TTACACCAGA TGGTATTATA
AATACAGATA TAGGTCCGGA AATTGGCTGG AATTATGAAG TAGGCACAAC ATTGTCTTTA
CTTAAACAAC GCTTACAAAT TAATGCTGCT GCTTACCTCC TATCTGTAAA CGACTTACTG
GTTGCAGAAC GTGTGGGTAA CGATCAATTT ATTGGCAGAA ATGCAGGACA AACAGACCAT
AAAGGCATAG AAATATCAAT AGACTACAAG CAAAATATAG TTGAACAGCT TCAATTTAAA
ACCTTTTTAA ATGCGGAGTT TAACGCCCAT AAATTTATAG ACTTTGTAGA TGGAGACTCA
GACTTTTCTG GAAACGATTT AACAGGAGTA CCATCAGAGA AAATAAATGC TGGTATTTCT
TTACAACATA CAAGTGGTTT TTTCTTCTCT TCACAGTTAC AATATATTGG AGAACAACCA
ATAACAGATG CTAATACGCT TTATGCTGAA GATTATACAA CACTAAGATT AAGTGGTGGT
TACAATCAGT CTTTTAATGA AAAATTAAGT CTAGAAGTAA AAGGAGGCGT TAATAACGTG
ACAGATATAG CTTATGCATC TTCCATATTA ATTAACGCCT CTTCTTTTGG AAATAGCCTA
CCTAGATACT ACTATCCAGG TTTGCCTCGC CATTATTTTG CTAGTTTATC TTTAAACTAT
AATTTTTAA
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| Protein sequence | MMRHLLVVFS FFAIATTYAQ TNNTEILIVS EDNIPLEDVI AYKSSNVIAT SNDKGILSFK
NPSTEEFILR LTLKDFKPVS LKISPNTFKY TVVLSKAEEE LNTVILASTY QKESKVLIPT
TSVTAESIAE GSPIDLVDAI NETSGVYIQR GAINTNRITI RGIGSRTLFG TNKIRAYFNG
FPITNGIGET AIDIFNTQDI ASIEIIKGPK ATQYGANLGG TLLLNSKDPK KEGLVLKNTV
TIGSFELFKE SLSLNLKEDK LSLHLNADHQ EHEGYRENNR YNRNALFINT SYTLNKTFTI
NGLVQHINNF AQIPSSLNLT DFNEDPTQAA FTWAQSQGFE DNRQTLVGLG LSSNISDSWS
NATNVYYSYL DHYEPRPFNI LAEITNTYGV RTVFANTFNL NMKSANLSFG VEFNQDHYVV
TTTENLYEDN NGNGSLEGSL LSDNTEIRSQ LQLFGTSTLP ITEKLTAEIG LHLNKTSYNL
DDNFNEAEAN TSADREFDII VAPNLSLLYK LNNTVTTYLN ISRGFNYPSL EETLTPDGII
NTDIGPEIGW NYEVGTTLSL LKQRLQINAA AYLLSVNDLL VAERVGNDQF IGRNAGQTDH
KGIEISIDYK QNIVEQLQFK TFLNAEFNAH KFIDFVDGDS DFSGNDLTGV PSEKINAGIS
LQHTSGFFFS SQLQYIGEQP ITDANTLYAE DYTTLRLSGG YNQSFNEKLS LEVKGGVNNV
TDIAYASSIL INASSFGNSL PRYYYPGLPR HYFASLSLNY NF
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