| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_12468 |
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| Symbol | |
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| ID | 9297983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Croceibacter atlanticus HTCC2559 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014230 |
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| Strand | + |
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| Start bp | 2704855 |
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| End bp | 2705718 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor rpoD (Sigma-A) |
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| Protein accession | YP_003717235 |
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| Protein GI | 298209056 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAAC TAAAGATTAC AAAGCAGGTT ACCAATCGTG AAACCGCTTC ATTAGACAAG
TATTTACAAG AAATTGGAAA GGTAGACTTA ATCACTGCCG AAGAAGAGGT AGAGTTAGCA
CAACGTATTA GAGCTGGAGA CAATCGTGCA TTAGAAAAAC TAACAAAAGC CAATTTAAGG
TTTGTTGTGT CTGTATCTAA ACAATACCAA AACCAAGGAC TAACATTACC AGACCTAATT
AATGAAGGTA ATTTAGGACT AATAAAAGCT GCAAAACGCT TTGACGAAAC ACGTGGTTTT
AAATTTATCT CGTATGCCGT ATGGTGGATT CGTCAATCTA TCCTACAAGC ATTAGCAGAA
CAATCTCGTA TTGTAAGATT GCCTCTTAAC AAAATTGGAT CTATTAATAA GATTAACAAG
ATGTATGCGT ATTTGGAACA GTCTAACCAA AGACCACCTA CTCCAGAAGA AATTGCACAG
GAATTGGAAA TGACGATTTC TGAAGTAAAA GAATCTCTTA AAAACTCTGG TCGCCACCTT
TCAATGGATG CGCCTTTAGT AGATGGTGAA GACTCTAACC TTTATGATGT CTTAAAATTT
GGAGAATCAC CAAACCCAGA AAAAGACCTT TTAGTTGAGT CATTACAAAC TGAAATAGAT
AGAGCATTAG AAACACTTAC ACCTAGAGAG GCAGATGTTA TAAGACTGTA TTTTGGTTTA
GGACAACAGC AACCGCTAAC ACTTGAGGAG ATTGGAGAAA CCTTCGAGCT TACTAGAGAG
CGTGTTCGCC AAATAAAGGA AAAAGCCACA AGACGTTTAA AACATACTTC TAGAAGTAAG
ATCTTAAAAA CCTATTTAGG CTAA
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| Protein sequence | MRQLKITKQV TNRETASLDK YLQEIGKVDL ITAEEEVELA QRIRAGDNRA LEKLTKANLR
FVVSVSKQYQ NQGLTLPDLI NEGNLGLIKA AKRFDETRGF KFISYAVWWI RQSILQALAE
QSRIVRLPLN KIGSINKINK MYAYLEQSNQ RPPTPEEIAQ ELEMTISEVK ESLKNSGRHL
SMDAPLVDGE DSNLYDVLKF GESPNPEKDL LVESLQTEID RALETLTPRE ADVIRLYFGL
GQQQPLTLEE IGETFELTRE RVRQIKEKAT RRLKHTSRSK ILKTYLG
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