Gene CA2559_11323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_11323 
Symbol 
ID9297752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2459800 
End bp2460666 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content36% 
IMG OID 
Productputative sigma factor A 
Protein accessionYP_003717006 
Protein GI298208827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAC TCAAGATTAC CAAGCAGGTT ACAAACAGAG AATCTAAATC TTTAAATAAC 
TACCTGCAAG ACGTTAGTAA ACTAGATTTA ATAACGGCTG AAGAAGAAGT TGAGTTAGCA
CAAAGAATAC GAGAAGGTGA TCAGATAGCA TTAGAGAAGT TAACGAAAGC TAACTTACGT
TTTGTGGTGT CTGTTGCCAA GCAATACCAA AATCAAGGAT TAAGATTACC AGATTTAATT
AACGAAGGAA ATGTTGGTTT AGTTAAAGCC GCTAAACGTT TTGATGAAAC TCGTGGTTTT
AAATTTATCT CTTACGCCGT ATGGTGGATT CGTCAATCTA TACTACAAGC ACTAGCAGAA
CATTCTAGAG TTGTACGTTT ACCTTTAAAT AAGATTGGTG TTATTAACAA GATTAATAAA
ACATTCTCTT ATTTAGAGCA AGCTTATGAG CGTCCGCCTT CTGCTGCAGA AATTGCAAAG
GAGTTAGATA TGCCTGTAAG CAAGGTGAAA ACTGCAATGA AAAACTCTGG ACGTAGCCTT
TCTATGGATG CGCCATTTCA AGAAGGTGAA AACGACTCTA ACTTATACGA TGTATTAAAG
AGTGGAGAAA GCCCAAGCCC AGATAATAAC TTAATGCAAG ATTCTTTAAG TGTTGAGATA
GAGCGTGCTC TAGATACCCT TACAGAACGT GAAGCAGATG TTATTAGACT TAACTATGGT
CTTGGAGGAC AACAGCCGTT AACTTTACAA GAAATAGGTG AAACTTTTGA TTTAAGTAGA
GAGCGTGTTC GTCAAATTCG TGAAAAAGGA ATTAGACGTT TGCGTCACGA AAGTAAGAGT
AAGATCTTAA AGAAATACTT AGGATAG
 
Protein sequence
MRQLKITKQV TNRESKSLNN YLQDVSKLDL ITAEEEVELA QRIREGDQIA LEKLTKANLR 
FVVSVAKQYQ NQGLRLPDLI NEGNVGLVKA AKRFDETRGF KFISYAVWWI RQSILQALAE
HSRVVRLPLN KIGVINKINK TFSYLEQAYE RPPSAAEIAK ELDMPVSKVK TAMKNSGRSL
SMDAPFQEGE NDSNLYDVLK SGESPSPDNN LMQDSLSVEI ERALDTLTER EADVIRLNYG
LGGQQPLTLQ EIGETFDLSR ERVRQIREKG IRRLRHESKS KILKKYLG