Gene CA2559_11118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_11118 
Symbol 
ID9297711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2416054 
End bp2417787 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content32% 
IMG OID 
Product2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acidsynthase/2-oxoglutarate decarboxylase 
Protein accessionYP_003716965 
Protein GI298208786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTATT CTAAAATTCC TGTTGCGCAA TCTGTTGTCG CACTTTGTAT TTCTAAAGGA 
ATAACTAATG TTGTTATTTC ACCAGGATCT CGTAATGCAC CACTAACCAT AGGGTTTTCG
GAGCATCCAG ATATTAAAGC GTATAGTATT GTAGATGAGC GTTGTGCTGC TTTTTTAGCC
TTAGGCATGG CACAACAATT AAAACAACCA GTAGCTTTAG TATGTACATC TGGCTCTGCA
TTACTAAATT ACTATCCTGC AATTGCAGAA GCATTTTACA GTGACATTCC TTTAGTTGTA
ATATCAGCAG ATAGGCCTGT AGAACGTATA GATATTGGTG ATGGCCAAAC TATTAGACAA
AAGAATGTAT ACGGTAATCA TATTTTATAC TCTGCTAACT TATATTCTGA AGCTGTTTTA
GAAGAACATC CTAAAGACAT TAAATTACAA CAAAAACAAT GGGAGTCTCA TAGGCATAAT
GAGCAAGAAA TAAATAAAGC ATTAAATACA GCCATAGAGG AACAAGGACC TGTACATATT
AATGTACCAT TTTATGAACC TTTATATGAT ACTGTGTCAG AAACAAGTTT GGAGCCCTTT
AAAGTTTCAC CAGATGTTAG GGAAAAATCT GTTACAGAAG ATGAGTTGAG TAGGTATGCT
AAGATTTGGA ATAGCTCTCA ACGTAAGTTA ATTCTTATTG GAGTACAAGA TCCTAATACA
ATAGAGCAGC AGTTTTTAGA TGCTTTTGCA AAAGATGAAT CTGTTATAGT TATGACAGAG
ACCACATCAA ACGTGCACCA TCCCAATTTT TTTCCGAGTA TAGACACTAT AATAGCACCA
ATTGAACAAC AGGACTCTAA GGAAGAGCTG TTCAAAGGTT TACAGCCAGA CATATTACTC
ACCTTTGGAG GTTTAATTGT TTCAAAAAAA ATTAAAGCAT TTTTAAGAAC TTACCAGCCT
AAACACCATT GGCATGTAGA TCCAAAAAAA GCATATGATA CTTATTTTTG TTTAGAAAAG
CATTTTGAGT ATTCACCAAA CACCTTTTTA ACTACATTTT CTTCCTTAAC TAAACCAGTA
AAGAGTAATT ACTTTCAGTT CTGGAATGGT ATTAAAATTG AACGTTTAAA ACTTCAGAAA
GATTATGAAG ATACAGTGCC ATTTTCAGAT TTTTCAGCTT ATAAGTGTCT TTTAGAAAAA
CTGCCAAATA ATTCATTAGT ACACTTAAGT AATAGCTCGA CAATAAGATA TGCACAACTG
TTTCAGCTAA ACAAAACAAT TGATGTATTT TGTAATAGAG GAACAAGTGG TATAGATGGC
AGTACATCTA CAGCTATTGG TGCTTCATTA GTTTCAAAAA AACAAACTAT TTTAATAACT
GGAGACCTTA GTTTCTTTTA TGATAGTAAT GCACTTTGGA ATACTTATAT CCCTAATTCT
TTCAGAATAA TCTTAATAAA TAATAATGGT GGCGGTATTT TTAGAATATT ACCAGGTCAC
GAAGAAACAG AAACATTTAA TACTTATTTT GAAACTACTC ATAACCTAAC GGCAAAGCAG
TTATGTAAAA TGTATAATTT TAAATACGAG AACGCCACTA GTACTGAAGA AATACAACAT
AGTTTAGAAA CGTTTTTTGA TGAAGCAGAC GCTCCAAAAC TGTTAGAAAT CTTTACACCA
AGAATAATTA ACGATAAAGT ATTAAAAGGT TATTTTAAAC ATCTAAAATC TTAA
 
Protein sequence
MKYSKIPVAQ SVVALCISKG ITNVVISPGS RNAPLTIGFS EHPDIKAYSI VDERCAAFLA 
LGMAQQLKQP VALVCTSGSA LLNYYPAIAE AFYSDIPLVV ISADRPVERI DIGDGQTIRQ
KNVYGNHILY SANLYSEAVL EEHPKDIKLQ QKQWESHRHN EQEINKALNT AIEEQGPVHI
NVPFYEPLYD TVSETSLEPF KVSPDVREKS VTEDELSRYA KIWNSSQRKL ILIGVQDPNT
IEQQFLDAFA KDESVIVMTE TTSNVHHPNF FPSIDTIIAP IEQQDSKEEL FKGLQPDILL
TFGGLIVSKK IKAFLRTYQP KHHWHVDPKK AYDTYFCLEK HFEYSPNTFL TTFSSLTKPV
KSNYFQFWNG IKIERLKLQK DYEDTVPFSD FSAYKCLLEK LPNNSLVHLS NSSTIRYAQL
FQLNKTIDVF CNRGTSGIDG STSTAIGASL VSKKQTILIT GDLSFFYDSN ALWNTYIPNS
FRIILINNNG GGIFRILPGH EETETFNTYF ETTHNLTAKQ LCKMYNFKYE NATSTEEIQH
SLETFFDEAD APKLLEIFTP RIINDKVLKG YFKHLKS