| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_10333 |
|---|
| Symbol | |
|---|
| ID | 9297556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2252939 |
|---|
| End bp | 2254798 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | 30S ribosomal protein S1 |
|---|
| Protein accession | YP_003716812 |
|---|
| Protein GI | 298208633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.869439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG AAAAAACAAC TCCAAAAGTC TTAGAAGAGC AAGTAGACAC TCAAGCTACA
GCAACTGCAG AAGAGACTAC AAAAAAAGCA AATTACATCT CTCCAGCTCA GGAAAACCCT
GAGAAGTTCC TTGAGGAATT TAACTGGGAA AACTACAAAG AAGGTATTGA GCCTATCGAT
GAAGGGAAAC TAGATGAGTT TGAAAAATTA GTGAAAGACA ACTTTGTTGA TACATTAGAT
GATCAGTTAA CTACTGGTAC TGTTATTAAC ATTACAGATC GTGATGCTAT TATAGACATT
AACGCTAAGT CTGAAGGTGT AATTTCTCTT AATGAGTTCC GTTACAATCC AGATCTTAAA
GTTGGTGACA CTGTAGATGT AATGATTGAT GTGCGTGAAG ATGCAGAAGG TCAATTAATA
TTATCTCACC GTAAAGCACG TACGATTAAA GCTTGGGAGC GCGTAAATGA CGCTCACGAC
GATGGTACTA TCGTTAATGG TTTTGTAAAA TGCAGAACTA AAGGTGGTAT GATTGTAGAT
GTATTTGGTA TCGAGGCATT CTTGCCAGGT TCTCAAATTG ATGTGAAGCC AATTCGTGAT
TACGATGCTT ACGTTGGTAA AACAATGGAA TTTAAGGTTG TAAAAATCAA CCATGAATTT
AAAAACGTTG TAGTATCTCA CAAAGCGCTT ATCGAAGCAG ATATCGAAGA GCAGAAAAAA
GAAATTATTG GGCAGCTTGA AAAAGGTCAA GTACTTGAAG GTACTGTTAA AAACATTACA
TCTTACGGTG TATTTGTTGA TCTTGGTGGA GTTGATGGAT TGGTACACAT TACAGATCTT
TCTTGGTCTC GTATTAACCA TCCAAACGAA ATCGTTGAGC TTGACCAGAA ACTTAACGTT
GTTATCCTTG ACTTTGATGA GGACAAAACA CGTATCCAAC TTGGTCTTAA GCAACTAAGC
AAGCATCCTT GGGAAGCACT TGGTGATGAG CTAAAAGTTG GTGATACAGT AAAAGGTAAA
GTAGTTGTTA TTGCAGACTA CGGTGCGTTT ATTGAAGTAG CTGAAGGTGT AGAAGGTCTT
ATCCACGTTT CTGAAATGTC TTGGAGCACG CACTTGCGTT CTGCACAAGA TTTTGTAAAT
GTTGGTGACG AGGTAGAAGC TCAGATCTTA ACTATGGATA AAGAAGACCG TAAAATGTCT
CTTGGCATGA AGCAACTATC TCAAGATCCT TGGACAGATA TCACGTCTAA GTATCCAGTT
GGTTCACGTC ACGAAGGTAT TGTACGTAAC TTTACAAACT TTGGTGTGTT TGTTGAATTA
GAAGAAGGAA TTGATGGATT AATTTACATC TCAGACCTTT CTTGGACTAA GAAAATTAAG
CATCCATCTG AGTTCTGTAA CGTAGGAGAT AAATTAGAAG TAGTTGTTCT TGAATTAGAT
GTTGAAGGAC GTAAGTTAAG CTTAGGTCAC AAACAAATTG AAGACAACCC TTGGAACAAG
TATGAAGGTG AGTTTGCAGT AGGTACTAAA CACACTGCTA CTATTTCTGA CATAGTTGAC
AAAGGTGCTA CTATTGAATT TAACGAAGAT ATTACTGCAT TTGTACCACA ACGTCACCTT
GAGAAAGAAG ACGGAAGCAA ATTAGGTAAA GGTGAAGAAG CAGAATTCGT AATTATTGAA
TTCAATAAAG AATTCAAGCG TGTTGTTGCA TCTCACATGT CTTTACACAA AGAAGAAGAA
GCTAAAATTG TGAAGCAAGC TGCTAAGAAA GCTTCTGAAG CAAATGCTGA CAAACCAACA
CTAGGTGATG CTAACGCAGA ACTACAAGCG TTGAAAGATA AAATGGAAGG TAAGAATTAA
|
|---|
| Protein sequence | MAEEKTTPKV LEEQVDTQAT ATAEETTKKA NYISPAQENP EKFLEEFNWE NYKEGIEPID
EGKLDEFEKL VKDNFVDTLD DQLTTGTVIN ITDRDAIIDI NAKSEGVISL NEFRYNPDLK
VGDTVDVMID VREDAEGQLI LSHRKARTIK AWERVNDAHD DGTIVNGFVK CRTKGGMIVD
VFGIEAFLPG SQIDVKPIRD YDAYVGKTME FKVVKINHEF KNVVVSHKAL IEADIEEQKK
EIIGQLEKGQ VLEGTVKNIT SYGVFVDLGG VDGLVHITDL SWSRINHPNE IVELDQKLNV
VILDFDEDKT RIQLGLKQLS KHPWEALGDE LKVGDTVKGK VVVIADYGAF IEVAEGVEGL
IHVSEMSWST HLRSAQDFVN VGDEVEAQIL TMDKEDRKMS LGMKQLSQDP WTDITSKYPV
GSRHEGIVRN FTNFGVFVEL EEGIDGLIYI SDLSWTKKIK HPSEFCNVGD KLEVVVLELD
VEGRKLSLGH KQIEDNPWNK YEGEFAVGTK HTATISDIVD KGATIEFNED ITAFVPQRHL
EKEDGSKLGK GEEAEFVIIE FNKEFKRVVA SHMSLHKEEE AKIVKQAAKK ASEANADKPT
LGDANAELQA LKDKMEGKN
|
|---|
| |