Gene CA2559_10283 details

Gene Information

• Locus tag: CA2559_10283
• ID: 9297546
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 2245045
• End bp: 2245590
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 32%
• Product: RNA polymerase ECF-type sigma factor
• Protein accession: YP_003716802
• Protein GI: 298208623

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAGATC ATCAATCACT TTTTATAACT CAGCTTAAAG ACAAGGCCAC AAGAGAGACA 
GCCTTTAGGA AGCTTATGGC CGATTATAAA GAACGGTTAT ATTGGCATAT TCGTAATATC 
GTTAAGTCTC ATGACGATGC AGATGATGTG CTTCAAAATA CATTTATCAA GATTTACAGA 
TATATAGATA AATTTAAAGG AGACAGTAAG TTATACACGT GGATGTATAG AATTGCAACT 
AATGAAGCTC TTACATTTTT AAGCAAACAG GCTAAAAGAA AATCTATAAC AGATGAGGAG 
CTACAAACAA GTCTTATTGA AAATTTAGAA AGCGATGTTT ATTTTGAAGG CGATGAGATT 
GCTAAAAAAT TACAAGAAGC TATAGCTACA TTACCAGAAA AACAACGCCT AGTCTTTAAT 
ATGAGATATT TTCAGGAATT AAAGTATGCT GATATCTCAG AAATTACAGA AACAAGTGAA 
GGGTCTTTAA AGGCTAGTTA TCACTTGGCT TCAAAAAAAA TTGAAGAGTA CTTAAAAACA 
AATTAA 

 

Protein sequence

MEDHQSLFIT QLKDKATRET AFRKLMADYK ERLYWHIRNI VKSHDDADDV LQNTFIKIYR 
YIDKFKGDSK LYTWMYRIAT NEALTFLSKQ AKRKSITDEE LQTSLIENLE SDVYFEGDEI 
AKKLQEAIAT LPEKQRLVFN MRYFQELKYA DISEITETSE GSLKASYHLA SKKIEEYLKT 
N