Gene CA2559_10048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_10048 
Symbol 
ID9297499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2198494 
End bp2199768 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content36% 
IMG OID 
Productputative transporter 
Protein accessionYP_003716755 
Protein GI298208576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA AAAAGAATGA TCCTTACGCA GCACTGCGAT TTAGAGAGTT TAATATCTTC 
TTATTAGTAC GTTTTGCTAT GGTGTTTGCG TGGTCTATGC AATTTGTCGT GATAGAGTGG
CAGGTTTATA GTATAACTAA AGATCCTTTT TCATTAGGTA TTATTGGTTT AATGGAAGTT
ATTCCGGCTG TCTCTTTGGC ATTGTTTGCA GGTCATGTTG TAGATCAAAA AGAAAAGAAA
GGATTATTGT TAAAGTGTAT ACTAGGTTTT TCTGTCATTA GTTTTGGACT ATTTCTCATT
ACCTGGCCAG AAGTAATAGG AGACTGGTCT CAAAATACAG TATTGTATAC AATTTATGCA
CTGGTATTTT TAGGAGGTGT TGTAAGATCA TTTATTGGTC CCACTATATT CTCATTATTC
TCATTACTTG TTCCTAAGAA AATATATCCT AATGCTGCAA CTTGGAGTAG CTCTGTATGG
CAAATGGGTG CAGTTGTTGG ACCTGCCATT GCCGGATTTG CCATTAATTG GATAGGTGTA
CATTGGTCTA TGTGTTTTGT ATTTGCATGT TCTTTAGTGG CATTTTTAAG TTTAACTCAA
ATACCTAAGA AACCAATTTT AAATACTAAG ATAGGCGAAC CAGTTTTTAA GAGCTTAAAG
GAAGGATTAA ACTTTGTGTT TTCTACTAAG ATAATATTAG GTGCGTTAAC ATTAGATATG
TTTGCAGTTC TATTTGGTGG TGCAGTAGCG TTGCTTCCTG TTTTTGCGCA AGATATCTTA
AAGGTAGGAC CAGAAGGCTT TGGAGTATTA AGAGCTGCGC CAGCAGTTGG CGCATTAATC
ATCATGTTTA CCTCTGCGTA TTTTCCTCTC AATAAAAATG CAGGCTACAA ATTATTAGGT
GCCATATTTG CTTTTGGCTG TTGTATAATA TTATTTGGAG TGTCTACTTG GTTCTGGGTT
TCTGTAATTG CATTATTCTT AAGTGGTATA ACAGATGGTA TTTCTATGAT TATAAGACAA
ACCATATTAC AATTGCGAAC ACCAGATGAA ATGCGTGGTC GTGTGGCTTC TGTAAACTCT
ATGTTTGTAG GGTCTTCTAA TGAGTTAGGT GCTTTTGAAA GTGGCTTAAC AGCAAAACTT
ATGGGAACAG TTACTGCTGT AATATTTGGC GGTAGTATGA CGCTAATTAC AGTGGTTTCT
ACTGGAGCAT TGTTACCAAG TTTAAGAAAA TTAGATCTTC GGAAAGACTT AGAAGAACAT
GAACTTAAAG AATAA
 
Protein sequence
MEKKKNDPYA ALRFREFNIF LLVRFAMVFA WSMQFVVIEW QVYSITKDPF SLGIIGLMEV 
IPAVSLALFA GHVVDQKEKK GLLLKCILGF SVISFGLFLI TWPEVIGDWS QNTVLYTIYA
LVFLGGVVRS FIGPTIFSLF SLLVPKKIYP NAATWSSSVW QMGAVVGPAI AGFAINWIGV
HWSMCFVFAC SLVAFLSLTQ IPKKPILNTK IGEPVFKSLK EGLNFVFSTK IILGALTLDM
FAVLFGGAVA LLPVFAQDIL KVGPEGFGVL RAAPAVGALI IMFTSAYFPL NKNAGYKLLG
AIFAFGCCII LFGVSTWFWV SVIALFLSGI TDGISMIIRQ TILQLRTPDE MRGRVASVNS
MFVGSSNELG AFESGLTAKL MGTVTAVIFG GSMTLITVVS TGALLPSLRK LDLRKDLEEH
ELKE