Gene CA2559_09423 details

Gene Information

• Locus tag: CA2559_09423
• ID: 9297368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 2061599
• End bp: 2063593
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 35%
• Product: DNA ligase
• Protein accession: YP_003716630
• Protein GI: 298208451

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.624424
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGTTA AAGATCAGAT ACAACAACTT AGAGAAGAGC TAAGGCAACA TAATTACAAT 
TATTATGTAT TAGACAAGCC AGAAATCTCG GACTATGATT TTGATCAAAA ATTAAAACAG 
TTACAGGATT TAGAGACAGA AAACCCTGAG TTTTATGATG CAAATTCGCC AACGTTGAGA 
GTTGGTGGGC AAGTCACTAA AAACTTCGAT ACAACTACCC ATGACTATCG TATGTATTCT 
CTAGACAATT CTTATTCTAA AGAAGATTTA GAAGATTGGG AAAAACGTAT TATGAAGATG 
GTAGATGGAG ATGTGCATTA TACTTGTGAG TTAAAATATG ATGGCGCTTC AATAAGTTTA 
ACTTATGAGG ATGGAGAGCT TATTAGAGCT GTAACAAGAG GTGATGGTTT TAAGGGAGAT 
AATGTAACCA ATAATGTTAA GACAATACGT TCAATTCCTT TAAAATTAAA TGGAGACTAT 
CCTAAACGAT TTGATATTAG GGGTGAAATT ATCTTACCTT TAGAAGGGTT TACAAAAATG 
AATGCAGAGC GCGTAGCCAA CGGTGAAGAA GCTTATGCTA ACCCAAGAAA TACAGCTTCT 
GGAAGTTTAA AATTACAGGA TAGTACAGAA GTTTCAAAAC GCCCATTAGA TTGTTTGCTA 
TACTCAATAA TTGGCAAAAA CTTAAATTTC AAAACCCAAT TTGAAGGTTT AGAAAAGGCA 
AGAGAATGGG GCTTTAAAGT ACCAGAAGTT GCAACACTAG CAAAAAGCAC GAAAGAGGTT 
ATGGCGTTTG TTAATTATTG GGACACCCAT CGTCACGATT TACCATATGA AACAGATGGT 
GTTGTAATAA AAGTAAATAA TTTACAGCAA CAAGAAGAGT TAGGGTATAC TGCTAAGGCA 
CCACGTTGGG CAATGGCTTA TAAGTTTAAA GCAGAGCAGG TTTCTACAGT ATTAGAGAAA 
ATTACGTATC AAGTTGGCCG CACTGGTGCC ATTACACCTG TTGCTAACTT AATACCTGTG 
CAGTTAGCTG GTACAACTGT TAAGAGAGCC TCGTTGCACA ATGCAGATCA AATAGAAAAA 
CTGGACATAA GAGAAGAAGA CACTGTTTTT GTAGAAAAAG GTGGAGAAAT TATTCCTAAA 
ATTATAGGTG TCGATTTTAC AAAAAGAGAT AAAAACTCTA AACCTACACA ATATATTGAG 
CATTGTCCAG AATGTGAAAC GCCGTTAGTG AGAAACGAAG GCGAAGCACA ACATTATTGT 
CCAAATGAAG AACGTTGTCC ACCACAAGTT GTAGGGAGAA TTCAACATTA TATATCACGT 
AAAGCTTTAG ATATAGAAGG GTTGGGAGGA GAAACTGTCG CGTTATTAGC AAATGCAGGT 
CTTATAAAGA ATTATGCAGA TTTATATACA TTAAAAATTG AAGATGTATT GCCATTAGAA 
CGTATGGCTC AAAAAAGTGC AGAAAATTTA ATTAATGGAA TTGAAGCTTC AAAACAAATT 
CCTTTTGAAC GTGTATTATT TGGTTTAGGC ATAAGACACG TTGGTGAGAC TGTAGCAAAA 
ACACTTGTTA AAACGTTTAA AACAATTGAA AACTTAGCAA ATGCCAAAGA GGAAGAGCTT 
GTTGAGGTAG AAGAAATAGG AGGTAAGATA GCAGAAAGTG TTGTAGTCTT TTTTAGTGAT 
GAGTATAAAA AAGAGACCGT ACAACGTTTA AAAGAGTATG GTGTTCAATT AGAGATATCT 
GCAGAACAAT TACAAGGACA AACAAATAAG CTTGAAGGCG AAATAATAGT TGTATCTGGT 
GTATTTAATA AACTAAGTAG AACAGAACTT AAAAAAGCTA TTGAAGATAA TGGCGGTAAA 
GTATCCAGTT CAATATCTTC CAAAACTACA TACTTGGTTG CAGGAGAAAA TATGGGTCCT 
AGTAAACGCA CAAAAGCAGA AGGTTTAAAT GTTCCAATTA TAACAGAAGA TGAGTTTTTA 
GATAAAATAC AATGA 

 

Protein sequence

MTVKDQIQQL REELRQHNYN YYVLDKPEIS DYDFDQKLKQ LQDLETENPE FYDANSPTLR 
VGGQVTKNFD TTTHDYRMYS LDNSYSKEDL EDWEKRIMKM VDGDVHYTCE LKYDGASISL 
TYEDGELIRA VTRGDGFKGD NVTNNVKTIR SIPLKLNGDY PKRFDIRGEI ILPLEGFTKM 
NAERVANGEE AYANPRNTAS GSLKLQDSTE VSKRPLDCLL YSIIGKNLNF KTQFEGLEKA 
REWGFKVPEV ATLAKSTKEV MAFVNYWDTH RHDLPYETDG VVIKVNNLQQ QEELGYTAKA 
PRWAMAYKFK AEQVSTVLEK ITYQVGRTGA ITPVANLIPV QLAGTTVKRA SLHNADQIEK 
LDIREEDTVF VEKGGEIIPK IIGVDFTKRD KNSKPTQYIE HCPECETPLV RNEGEAQHYC 
PNEERCPPQV VGRIQHYISR KALDIEGLGG ETVALLANAG LIKNYADLYT LKIEDVLPLE 
RMAQKSAENL INGIEASKQI PFERVLFGLG IRHVGETVAK TLVKTFKTIE NLANAKEEEL 
VEVEEIGGKI AESVVVFFSD EYKKETVQRL KEYGVQLEIS AEQLQGQTNK LEGEIIVVSG 
VFNKLSRTEL KKAIEDNGGK VSSSISSKTT YLVAGENMGP SKRTKAEGLN VPIITEDEFL 
DKIQ