Gene CA2559_08406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_08406 
Symbol 
ID9297165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp1842726 
End bp1844075 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content35% 
IMG OID 
Productsuccinate-semialdehyde dehydrogenase 
Protein accessionYP_003716428 
Protein GI298208249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA TAAATCCTTA TACAGGAGAA ACCATACAAA CATTTCCGCA GTTTACGCCA 
TCTCAAGTAA GTGCTTCAAT AACTAAAGCA CACGAAGCTT TTTTTTCTTG GAAGAAAACC
TCATTTAGTG AGCGTTCTAA CTTAATGCGT TCTGTAGCTA AAGGATTAAG AGAACATAAA
GATAAATACG CTAAAACAAT GACCCTTGAA ATGGGTAAGC CCATTGCTCA AGCTAAAGCA
GAAATTGATA AATGTGCTTG GTTATGTGAA TACTATGCAG ATACTGCAGA GCAACATTTA
ACTTCTAAGA TAATTAAGAC AGATGCTGCA AAAAGCTATG TAAACTACGA ACCTATTGGT
GTTGTCTTGG CGGTTATGCC ATGGAATTAT CCTTTCTGGC AAGTATTTAG GTTCATTGTA
CCTGCATTAA TGGCTGGAAA TGTTGGCGTT TTAAAGCATG CAAGTAATGT TATGGGCTGT
GCAGAACATA TAGAAGCTGT GTTTATAAAT GCTGGCTTCC CAAAGCATTG TTTTCAGAAT
TTACCAATAA ATTCAAGCAA GGTTGAAGCT ATTATTAGGC ACAAACATAT TAAAGCGGTT
ACCTTAACAG GTAGTAAACC TGCTGGTAGT ATGGTTGCAA GTGTGGCAGG CGAAGAAATT
AAAAAGTCTG TACTTGAACT TGGTGGTAGT AATGCACTGG TTGTTTTTAA AGATGCAGAA
ATAGATAATA CTGTAGCAAC ATGTGTACAA GCAAGATTTC AAAATACAGG GCAAAGTTGT
ATAGCAGGAA AACGATTGTT ATTACATAAA TCTATTGAAG AAGAGTTTCT TGATAAATTG
AAAAAAGAAG TAATTGCTTT AAAAAGCGGG AATCCTTTAG AGGAAGATAC CTATATAGGA
ACAATGGCCA GAGAAGATTT AGCTGAAGAA TTGGAAGAGC AATTAAAAGC TTCGGTTAAA
GAAGGCGCTA AAATTTTAAT AGGAGGAAAG CGAACCAATG CTTACTTTGA GCCAACTATA
GTTACTAATG TAACACCAGA AATGTCAATT TTTAAAGAAG AAACATTTGG ACCTGTTTTA
TCTGTAACTA TATTTAATAC AGATGAAGAG GCAGTTGAAT TAGTAAATCA ATCAGATTTT
GGATTAGGAG TTTCGATATT TACTGAAAAC GATTCTAAAA TTGAAAAACT AATTCCGTTG
TTTGAAGATG GTGCTGTATT TGTAAATGAG CTGGTAAAAA GTGATCCGCG ATTACCATTT
GGTGGAACAA AAATTTCAGG TTATGGTAGG GAGTTGTCTG AAGATGGTAT AAAAGAGTTT
GTAAATAAAA AGACAGTTTA CATTAAGTAG
 
Protein sequence
MKSINPYTGE TIQTFPQFTP SQVSASITKA HEAFFSWKKT SFSERSNLMR SVAKGLREHK 
DKYAKTMTLE MGKPIAQAKA EIDKCAWLCE YYADTAEQHL TSKIIKTDAA KSYVNYEPIG
VVLAVMPWNY PFWQVFRFIV PALMAGNVGV LKHASNVMGC AEHIEAVFIN AGFPKHCFQN
LPINSSKVEA IIRHKHIKAV TLTGSKPAGS MVASVAGEEI KKSVLELGGS NALVVFKDAE
IDNTVATCVQ ARFQNTGQSC IAGKRLLLHK SIEEEFLDKL KKEVIALKSG NPLEEDTYIG
TMAREDLAEE LEEQLKASVK EGAKILIGGK RTNAYFEPTI VTNVTPEMSI FKEETFGPVL
SVTIFNTDEE AVELVNQSDF GLGVSIFTEN DSKIEKLIPL FEDGAVFVNE LVKSDPRLPF
GGTKISGYGR ELSEDGIKEF VNKKTVYIK