| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_05215 |
|---|
| Symbol | |
|---|
| ID | 9296537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1183017 |
|---|
| End bp | 1184291 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | putative ATP-dependent RNA helicase |
|---|
| Protein accession | YP_003715807 |
|---|
| Protein GI | 298207628 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.190417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTG AAGATCTAAA CATAATTTCC CCTATTTTAA AATCTCTTGA TGAACAAGGC
TATGAGAAGC CTACCTCTAT TCAGGCACGT TCAATTCCAC TTATACTAAA AGGTGAAGAT
GTTTTAGGAA GTGCACAAAC CGGAACAGGT AAAACAGGTG CTTTTGCAAT TCCTATTATT
CAGCATTTAG CAAACGATTT AGAAAATGCT AAAGGTAAGC GTAAAATATT ATCACTAATA
GTTACACCAA CTAGAGAGCT TGCAATACAG ATAGGTGAGA ATTTTTCTGC CTATGGAAAA
TATACATCAT TAAAAAGCAC AGTCATTTTT GGAGGTGTAC CTCAACGTGC GCAAACTAAT
AAGCTTAAAA GCGGTGTTGA TGTTTTAATT GCGACACCAG GAAGATTGTT AGACCTTATG
GACCAAGGTT ATATTTCTTT AAAAGACGTT AAGTACTTTG TTTTAGATGA AGCCGACAGA
ATGTTGGATA TGGGCTTTAT TCACGATATT AAAAAACTAC TAACAAAACT TCCTAAGAAC
AGACAGTCTT TATTTTTCTC TGCTACAATG CCAAAGAATA TATTGACACT ATCTAATCAA
ATTCTTAAAA ACCCTAAAAA AGTTGAAGTA AATCCAGTTT CATCTACTGC AGAAACTATT
CAACAGTATT TATACACCAC CAACAAAACC AATAAAGGAG ACTTGCTGCT TCATATTTTA
GAAGATCCTA AGATAGACCA AGTTCTCGTT TTTTCTAAAA CTAAGCACGG AGCAGACCGT
ACGGTACGTA AACTCTTAAA GAAAAAGATA AAAAGTGCTG CCATACACGG AAACAAATCT
CAAAATCAAA GACAAAAAGC ATTAAAAGCA TTTAAAGATG GCAACATAAG GGTAATGGTT
GCTACAGATA TTGCAGCTCG AGGAATTGAT ATTGACAAAT TAGAGTACGT GATTAACTAC
GACATTCCTA ATGAACCAGA AACTTATGTT CATAGAATTG GCCGATGTGG TCGTGCAGGA
GAAGATGGTA TAGCTATATC TATTGGTGAG CCAGAAGAAA TACAGTTCAT AAAAGACATT
GAAAAGCTAA TTAAGCAAAA AATTACGGTT ATAAAAGACA ATCCTTTTCC GCAGACAGAC
AAACCTATGA CAACTTCTGA GAAGAAAGCT GCTGAAAAAG AGAAGCAACG TATAAAACAG
GAATTTTTTG CAAACCGAAA GAAGAATAAA GGCTCTCAAA AAGGTGGCGG AAATAATAGA
CGTAAGAAAA AATAA
|
|---|
| Protein sequence | MTFEDLNIIS PILKSLDEQG YEKPTSIQAR SIPLILKGED VLGSAQTGTG KTGAFAIPII
QHLANDLENA KGKRKILSLI VTPTRELAIQ IGENFSAYGK YTSLKSTVIF GGVPQRAQTN
KLKSGVDVLI ATPGRLLDLM DQGYISLKDV KYFVLDEADR MLDMGFIHDI KKLLTKLPKN
RQSLFFSATM PKNILTLSNQ ILKNPKKVEV NPVSSTAETI QQYLYTTNKT NKGDLLLHIL
EDPKIDQVLV FSKTKHGADR TVRKLLKKKI KSAAIHGNKS QNQRQKALKA FKDGNIRVMV
ATDIAARGID IDKLEYVINY DIPNEPETYV HRIGRCGRAG EDGIAISIGE PEEIQFIKDI
EKLIKQKITV IKDNPFPQTD KPMTTSEKKA AEKEKQRIKQ EFFANRKKNK GSQKGGGNNR
RKKK
|
|---|
| |