Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_04670 |
Symbol | |
ID | 9296424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 1057562 |
End bp | 1059358 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | excinuclease ABC, C subunit |
Protein accession | YP_003715698 |
Protein GI | 298207519 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAGAC CACCTTTAGA CATACAAGTA AAGACTTTGC CAAGCAGTCC TGGCGTGTAC CAATATTTTG ATAAGGATGA TAAAATCTTA TATGTTGGAA AGGCTAAAAA CTTAAAAAAA AGGGTGAATT CCTACTTTAC TAAAAAGCAC GACAGTCATC GTATTGGTGT GATGGTAAAG AAGATTAAAA ACATAAAGCA TATAGTAGTT AATTCTGAAA CAGATGCACT TCTGCTAGAA AACAACTTAA TTAAAAAACT GAAGCCTCGT TTTAATGTCA TGCTTCGTGA TGACAAAACC TATCCTTGGC TTTGCATTAA AAAAGAACGC TTTCCTAGAG TATTTCCTAC GCGACGTGTT ATTAAAGATG GCAGCGAATA TTATGGTCCT TTTACAAGTA TGAAAACGGT ACATACCTTG CTTGACCTTA TTAAAGGCCT ATACCAACTT AGGACTTGTA AATATGATTT AGCTGAAGAA AAGATAGATG CCGGTAAATA CAAAGTTTGC TTAGAGTATC ATTTAGGAAA CTGTCAAGGT CCTTGTGAAG GTTACCAAAC AGAAGAGGAA TACCATAGCA ATATTGATCA TATAAGACAG ATTGTAAAAG GTAATTTTAA AGATTCGCTC ATTAAATTTA AAGACCAGAT GAAAGGTCAC GCAGAGCGTA TGGAGTTTGA AGATGCTCAG CGCATAAAAG AAAAGATACA AGTTTTAGAA AAGTACCAAA GCAAATCTAC AGTAGTAAAT CCTAAAATTA ATAATGTTGA TGTATTTTCA ATTGTTAGTG ATGAAGGCTT TGGGTACGTT AATTTTTTAC AGTTATCTCA CGGCTCAATA ATAAGATCTC ACACTATTGA ACTTAAAAAG AAGTTAGATG AAGGTGACCA AGAGTTACTA GAGCTTGGTA TTATTGAAAT ACGACAACGC TTTAACTCTC AATCTAAAGA AATTTATGTG CCTATGCATG TTGAGGTAGG TGAAGATTTA AAGGTGACCG TTCCTAAGCT AGGAGACAAG AAAAGTATTG TAGACCTTTC TACCAGAAAC GCTAAATATT TTAGGCAAGA GCGTTTTAAA CAAATGAAAA TTGTAGACCC AGATAGGCAC GTTAAGCGTA TTATGGCGCA AATGAAAGAA GATTTACGAC TTAATGAAGA ACCAAGACAT ATTGAATGTT TTGACAACTC TAACATTCAA GGTACAAATC CTGTAGCAGC ATGTGTGGTG TTTAAAGATG GTAAACCTAG CAAAAGCGAG TATAGAAAAT TTAATATTAA AACTGTTGAA GGTCCAGATG ACTTTGCCAG TATGGAGGAA GTGGTTTTTA GACGTTATAG GCGTCTTTTA AATGAAGACC AACCCTTACC GCAATTAATT ATAATTGATG GTGGTAAAGG CCAACTATCT TCTGCCGTAA AAGCATTAGA CGACTTAGGT TTACGTGGAA AGATTGCTAT TGTAGGTATT GCTAAACGCC TAGAGGAAAT ATTTTACCCA ACAGATAAAT ACCCTTTGTA TCTAGACAAA AAATCTGAGT CTTTAAAAAT AATACAACAC CTTAGGAATG AAGCACACCG CTTCGGTATT ACGTTTCACA GACAAAAACG AAGTAGCGCT GCTTTAGGCA CTGAACTTGA AAATATAACT GGAATAGGTG AAAAAACTGC AGTCGAGTTA TTAAAACACT TTAGAAGTAT TTCAAAAATT AAATCGGCTA AAAGAGAAGA CCTTGAACAG GTTGTTGGTG TAGCAAAGGC AAGCTTGGTT TATGAATTTT ACAATAAAGA AAACTAG
|
Protein sequence | MERPPLDIQV KTLPSSPGVY QYFDKDDKIL YVGKAKNLKK RVNSYFTKKH DSHRIGVMVK KIKNIKHIVV NSETDALLLE NNLIKKLKPR FNVMLRDDKT YPWLCIKKER FPRVFPTRRV IKDGSEYYGP FTSMKTVHTL LDLIKGLYQL RTCKYDLAEE KIDAGKYKVC LEYHLGNCQG PCEGYQTEEE YHSNIDHIRQ IVKGNFKDSL IKFKDQMKGH AERMEFEDAQ RIKEKIQVLE KYQSKSTVVN PKINNVDVFS IVSDEGFGYV NFLQLSHGSI IRSHTIELKK KLDEGDQELL ELGIIEIRQR FNSQSKEIYV PMHVEVGEDL KVTVPKLGDK KSIVDLSTRN AKYFRQERFK QMKIVDPDRH VKRIMAQMKE DLRLNEEPRH IECFDNSNIQ GTNPVAACVV FKDGKPSKSE YRKFNIKTVE GPDDFASMEE VVFRRYRRLL NEDQPLPQLI IIDGGKGQLS SAVKALDDLG LRGKIAIVGI AKRLEEIFYP TDKYPLYLDK KSESLKIIQH LRNEAHRFGI TFHRQKRSSA ALGTELENIT GIGEKTAVEL LKHFRSISKI KSAKREDLEQ VVGVAKASLV YEFYNKEN
|
| |