| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_03430 |
|---|
| Symbol | |
|---|
| ID | 9296173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 785913 |
|---|
| End bp | 788120 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | putative exoribonuclease |
|---|
| Protein accession | YP_003715450 |
|---|
| Protein GI | 298207271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AAAAATTCGG TAAGAAAAAA TCTACACAGA TTCCAAACCT TACTAAAACT
ATATTGGACA TTATTCGTAA GCGTCCAAAT CAAAACTTCA ATTACAAACA AATTGCTTCC
CAACTTAACA TTACAGATGC TAGCGGAAGA AATCAAATCA TAAAAAAACT TTCCCAATTA
GCTGCTAAAC AACAAATTGT TGAGGTAGAT CGTGGTAAAT TTCAATTTAA TGGCCCTCAA
GACTATGTTA CTGGTACCTT AGATATGACT AGTAAAGGTG ATGGTTATGT GGTCGTTGAA
GATTTAGAAG ACGATATTTT CATTCCTAGT AAGCATATTA ACAAAGCATT TCACGGTGAT
CAGGTAGAGG TATATATTTA TAATACCAGA AGAAAAAGCA AGAATGAAGG TGAAATTACC
AAAGTAATTG AACGAAAGAA AAAAGAATTT GTAGGCGTTA TTACTATCTC AGAAAAGTTT
GCATTTGTAA ACATTCAGGA TACTAAAATG TATACAGATT TCTTTATTCC AAAAAGTAAG
ATAAACGGCG CAGAAAATAA TATGATGGTC GTTGTAGAGC TAGAAGATTG GCCAGAAAAA
GCCGATTCTC CTTTTGGTCG CGTTATAGAA GTTCTCGGTG TTCCAGGAGA ACATGAAACA
GAAATACATG CGATTCTTGC ACAATATGGA TTACCACATG AATTTCCAAA AGAAGTAGAA
GAGTTTGCTA ACAAGATAGA TACATCTATA CAAGAATCTG AAATTAAGAA ACGTAGAGAT
ATGCGTGATA CGCTAACCTT TACAATAGAT CCTAAAGATG CAAAAGATTT TGATGATGCC
TTAAGTTTTA AGATTTTAGA AAACGGGCAT TACGAAGTAG GAATTCATAT TGCAGATGTA
TCTCACTATC TTAAACCAGG TACAATTTTA GATGATGAAG CTTATGAACG TGCAACATCT
GTTTATTTAG TAGATAGAGT AGTGCCAATG CTTCCAGAAG TATTATCTAA CAATGCTTGT
TCATTACGTC CTAATGAAGA AAAATATACC TTTTCAGCTG TTTTCGAGAT AGATGAAAAC
TCAAAAATAC ACAATCAATG GTTTGGTAAA ACTGTAACCT ATAGTGATGC CAGATTTGCA
TACGAAGAAG CTCAGGCAAT TATTGAAAGT AAATCCACTA GCATTCCTGC AGATGTTTCT
TTAACAGGAA AAGCCTATAA AACAGACGAT GCTATTGCAG ATGCTATTTT AAAAATGGAC
AAAGTAGCTA AAATCATGCG TAGAAAACGT ATGGGTCAAG GTGCTATTTC TTTTGATAAA
GTTGAAGTTA AATTTGAGCT TAACGAAGCT AATGAACCAG TTGGAGTTTT CTTTAAGACA
TCTAAAGATG CTAATAAACT TATTGAAGAA TACATGTTAC TTGCCAATAA GAAAGTAGCA
GAATTTATAG GTAAACAAGA CCCTAAAAAA ACATTTGTAT ACCGTTGTCA TGACGAGCCA
AATTCAGATA AATTAAGTGC CTTACAAAAC CTTGTAGGTC GTTTTGGGTA CACTCTTAAT
TTTAAATCAA GAAAGACTAC TACGCAATCT TTAAATAAAC TTTTACAAGA TGTAAATGGT
ACTAAAGAAC AAAATTTAAT AGATACGCTT ACCATTCGTA CTATGAGTAA AGCCTATTAT
TCTACAGAAA ATATAGGGCA TTACGGTTTA GCATTCGATT ATTATTCACA TTTCACATCG
CCAATACGTC GTTATCCAGA TGTCATGGCA CATCGTTTAT TACAGTATTA TCTAGATAAA
GGTAAATCTG CAGACGCAGA AACTTATGAA GATCAATGTA GCCATAGTAG TGAGATGGAG
TATTTAGCTA CCAAAGCAGA ACGTGACTCT ATAAAATTCA TGCAGATTAA ATTCATGCAG
GATCATAAAG ATGAAAATTT CTTAGGTGTA ATATCTGGAG TTACAGAATG GGGAATCTAT
GTAGAAATTA TAGATAACAA ATGTGAAGGT ATGGTAAGGT TAAGAGACAT CTCAGATGAT
CACTATGATT TTGATGAAGA AAACTATGCT ATTGTAGGTC GAAAAACTAA AAAAGTGTAT
CAATTAGGAG ATGAAGTTTA TGTAAAAGTA AAAGATGCAG ATCTTGTAAA ACGTCATTTA
GATTTTACAC TAATAGGAAG TAAAGCCGAA GTAGAAACAC AAGGATAG
|
|---|
| Protein sequence | MSKKKFGKKK STQIPNLTKT ILDIIRKRPN QNFNYKQIAS QLNITDASGR NQIIKKLSQL
AAKQQIVEVD RGKFQFNGPQ DYVTGTLDMT SKGDGYVVVE DLEDDIFIPS KHINKAFHGD
QVEVYIYNTR RKSKNEGEIT KVIERKKKEF VGVITISEKF AFVNIQDTKM YTDFFIPKSK
INGAENNMMV VVELEDWPEK ADSPFGRVIE VLGVPGEHET EIHAILAQYG LPHEFPKEVE
EFANKIDTSI QESEIKKRRD MRDTLTFTID PKDAKDFDDA LSFKILENGH YEVGIHIADV
SHYLKPGTIL DDEAYERATS VYLVDRVVPM LPEVLSNNAC SLRPNEEKYT FSAVFEIDEN
SKIHNQWFGK TVTYSDARFA YEEAQAIIES KSTSIPADVS LTGKAYKTDD AIADAILKMD
KVAKIMRRKR MGQGAISFDK VEVKFELNEA NEPVGVFFKT SKDANKLIEE YMLLANKKVA
EFIGKQDPKK TFVYRCHDEP NSDKLSALQN LVGRFGYTLN FKSRKTTTQS LNKLLQDVNG
TKEQNLIDTL TIRTMSKAYY STENIGHYGL AFDYYSHFTS PIRRYPDVMA HRLLQYYLDK
GKSADAETYE DQCSHSSEME YLATKAERDS IKFMQIKFMQ DHKDENFLGV ISGVTEWGIY
VEIIDNKCEG MVRLRDISDD HYDFDEENYA IVGRKTKKVY QLGDEVYVKV KDADLVKRHL
DFTLIGSKAE VETQG
|
|---|
| |