Gene CA2559_00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_00080 
Symbol 
ID9295497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp43327 
End bp44697 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content34% 
IMG OID 
Productalpha-amylase 
Protein accessionYP_003714786 
Protein GI298206607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.52316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ATTATAAGTA TAGTGCTTTA TTGCTTATTG CATTGTTTTT ATTTAGCTGT 
AATAAAGATG AGTCTTTTAC TGAAACTGAA ACCACTTCAG AAGAATCAGA ACTTACTGTT
AATGCTATGG CTACTATAGG TAGCGGAGTA ATGATGCAGG CTTTTTATTG GGATGTACCT
GCTGGCGGAA CATGGTGGAA TACTGTTAAC GGTAAGCTCC AAAATTGGAG CAATGCAGGA
ATAGATGCAA TCTGGTTACC ACCAGTTTCA AAAGCTCAAA ATGGTCCTTT TTCTATGGGG
TATGATCCTT TTGATTATTA TGATTTTGGT GAATATGATC AAATGGGAAG TGTAGAAACA
AGATTTGGCT CACGAACAGA ATTAGAGTCT TTAATTTCAA CAGCTCATAA TAATGGTATT
AGCGTTATTG CAGATATTGT AATAAACCAT AATAGTGGAG GAGCATCAGA GAGTAATGTC
TTTACAGGCT CAGATACTTA TACAGATTAC AATCCTGCTT CAGGTATTTT CTATAGAACG
CAATATGATT TTCATCCTAA TGATTATCAT AACAATGATT CTGGAGCCTT TGGCGGATTT
CCAGATCTCT GTCATCATAA ATCTTATGTA CAGGATCATT TATGGAATAA TCCTAATTCT
GTGGCAAAAT ATTATAAAAA CGTTCTAGGG TTTGATGGTT GGAGATTTGA TTATGTTAAG
GGCTTTGAGC CTTGGGTTGT AAACAGTTGG ACAAATGCAG TTGGAGGTTT TTCTGTTGGA
GAATATTGGG ATGCTAATGT AAATACATTA GAGTGGTGGG TTAATAACTC AGGATCAAGT
GCTTTCGATT TTGCATGTTA TTACAGGATG AGAGATGCAT TTCAAAATAA TGATTTAAAT
AATTTAAGTG GTGATATGTT ATGGAAACGT AATGCTAACA AAGCAGTCAC TTTTGTTGCA
AACCACGATA CAGATGAAAT CTTTAATAAT AAACTTTTAG CTTATGCGTA TATACTAACC
CATGAAGGTT ATCCTACGTT ATTTTATAAA GATTATGAAG AATGGTTAGA TAAGAACAAG
TTGAATAATC TTATTTGGAT ACATAATAAT CTTGCAGGAG GTTCTACAAT TAACCTTTAT
ACAGATGTAG ATGAATATAT AGCCAAAAGA AATGGCTACA ATAATAATGG TTTAGTTGTT
TACTTAAATA TTAGTAATAA TTGGCAAGAG CGTTGGGTAC AAACAAACTG GAACTCAACT
AGAATAAAGG ATTACACTGG AAATTCATCT TGGGAGCCAG TTACTCAAGC AGATGGTTGG
GTTAAAATTC AGGTGCCTCC AAATGGGTAT TCTGTGTGGT CTGTAAAATA A
 
Protein sequence
MKNYYKYSAL LLIALFLFSC NKDESFTETE TTSEESELTV NAMATIGSGV MMQAFYWDVP 
AGGTWWNTVN GKLQNWSNAG IDAIWLPPVS KAQNGPFSMG YDPFDYYDFG EYDQMGSVET
RFGSRTELES LISTAHNNGI SVIADIVINH NSGGASESNV FTGSDTYTDY NPASGIFYRT
QYDFHPNDYH NNDSGAFGGF PDLCHHKSYV QDHLWNNPNS VAKYYKNVLG FDGWRFDYVK
GFEPWVVNSW TNAVGGFSVG EYWDANVNTL EWWVNNSGSS AFDFACYYRM RDAFQNNDLN
NLSGDMLWKR NANKAVTFVA NHDTDEIFNN KLLAYAYILT HEGYPTLFYK DYEEWLDKNK
LNNLIWIHNN LAGGSTINLY TDVDEYIAKR NGYNNNGLVV YLNISNNWQE RWVQTNWNST
RIKDYTGNSS WEPVTQADGW VKIQVPPNGY SVWSVK